RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TMEM116Q8NCL8 245 aa11.46□□□□□ -0.58
COL5A1-205ENST00000464187 CORTO00230 105 aa11.45□□□□□ -0.58
COL5A1-205ENST00000464187 SUMO1P63165 101 aaKnown RBP11.45□□□□□ -0.58
COL5A1-205ENST00000464187 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
COL5A1-205ENST00000464187 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
COL5A1-205ENST00000464187 C22orf15Q8WYQ4 148 aa11.45□□□□□ -0.58
COL5A1-205ENST00000464187 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
COL5A1-205ENST00000464187 HELTA6NFD8 242 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 GNG4P50150 75 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 LINC00305Q7Z4B0 112 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 GPR61Q9BZJ8 451 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 GAR1Q9NY12 217 aaKnown RBP11.44□□□□□ -0.58
COL5A1-205ENST00000464187 C1RLQ9NZP8 487 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 TEX15Q9BXT5 2789 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 FSHBP01225 129 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 FXYD5Q96DB9 178 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
COL5A1-205ENST00000464187 FLNAP21333 2647 aaKnown RBP11.44□□□□□ -0.58
COL5A1-205ENST00000464187 ZNF320A2RRD8 509 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 CNIH1O95406 144 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 S100A2P29034 98 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 RPL15P61313 204 aaKnown RBP11.43□□□□□ -0.58
COL5A1-205ENST00000464187 OR5I1Q13606 314 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-205ENST00000464187 Q8N9W7 124 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 OR1B1Q8NGR6 318 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 BTF3L4Q96K17 158 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 IGF2BP2-AS1Q96M15 143 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
COL5A1-205ENST00000464187 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-205ENST00000464187 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
COL5A1-205ENST00000464187 I3L2K1 104 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 SLC17A3O00476 420 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 ORM2P19652 201 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 IL36BQ9NZH7 164 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 H3BUX3 64 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 IGLV2-8P01709 118 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 FXYD3Q14802 87 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 ZNF329Q86UD4 541 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 WNT10AQ9GZT5 417 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 V9GYV3 84 aa11.42□□□□□ -0.58
COL5A1-205ENST00000464187 CX3CL1P78423 397 aa11.41□□□□□ -0.58
COL5A1-205ENST00000464187 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
COL5A1-205ENST00000464187 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
COL5A1-205ENST00000464187 RBM14Q96PK6 669 aaKnown RBP11.41□□□□□ -0.58
COL5A1-205ENST00000464187 RASL11BQ9BPW5 248 aa11.41□□□□□ -0.58
COL5A1-205ENST00000464187 XKRY2A2RUG3 117 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 MYO9AB2RTY4 2548 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 IGLC1P0CG04 106 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 PLP1P60201 277 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 ERVFC1-1P60608 527 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 S100A12P80511 92 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 TIGITQ495A1 244 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 PYY3Q5JQD4 70 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
COL5A1-205ENST00000464187 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
COL5A1-205ENST00000464187 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.58
COL5A1-205ENST00000464187 TRAV9-1A0A075B6T8 112 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 HYPMO75409 117 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 GCGP01275 180 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 FABP4P15090 132 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 MYCNOSP40205 109 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 LY6EQ16553 131 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 IGHV7-81A0A0B4J1V7 117 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 K7EIM0 57 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 PEX7O00628 323 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 CD5LO43866 347 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
COL5A1-205ENST00000464187 NDPQ00604 133 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 RPEL1Q2QD12 228 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 C5orf56Q8N8D9 126 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 ARPC1AQ92747 370 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 LINC00479Q96M42 142 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 RNASE7Q9H1E1 156 aaKnown RBP11.39□□□□□ -0.59
COL5A1-205ENST00000464187 OSTCQ9NRP0 149 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 TRAPPC1Q9Y5R8 145 aa11.39□□□□□ -0.59
COL5A1-205ENST00000464187 A6NDX4 124 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 PSG1P11464 419 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 GP9P14770 177 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
COL5A1-205ENST00000464187 TAS2R60P59551 318 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 HSPB9Q9BQS6 159 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 ACANP16112 2415 aa11.38□□□□□ -0.59
COL5A1-205ENST00000464187 LYZP61626 148 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 BLNKQ8WV28 456 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 GSN-AS1Q9NRJ2 163 aa11.37□□□□□ -0.59
COL5A1-205ENST00000464187 HIGD1AQ9Y241 93 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms