RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RBP2P50120 134 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 FXYD7P58549 80 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 COPZ1P61923 177 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
ITGB1-208ENST00000464001 EIF4EBP1Q13541 118 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TAF9Q16594 264 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 CCSMST1Q4G0I0 132 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 AMMECR1LQ6DCA0 310 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TRAPPC6BQ86SZ2 158 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 CTAGE3PQ8IX95 158 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 MSRB3Q8IXL7 192 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 HIST3H2BBQ8N257 126 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 C10orf126Q8N4M7 172 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 MND1Q9BWT6 205 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TCEAL2Q9H3H9 227 aaPredicted RBP2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TAF9BQ9HBM6 251 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 OSTCQ9NRP0 149 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 DSPPQ9NZW4 1301 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 MBD5Q9P267 1494 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 ARHGEF11O15085 1522 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TRPM1Q7Z4N2 1603 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 ARHGAP32A7KAX9 2087 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 TCOF1Q13428 1488 aaKnown RBP2.29□□□□□ -2.04
ITGB1-208ENST00000464001 BCL9LQ86UU0 1499 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 DISP2A7MBM2 1401 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 MYOM3Q5VTT5 1437 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 IGHV3-73A0A0B4J1V6 119 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 LOC100130705A0A1B0GUX0 176 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 C17orf98A8MV24 154 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 J3QR89 54 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 TP53I11O14683 189 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 METTL15P1P0C7V9 234 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 HBBP68871 147 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 FUT5Q11128 374 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 DIAPH2-AS1Q14236 149 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 C3orf62Q6ZUJ4 267 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 LYPD1Q8N2G4 141 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 SIGLECL1Q8N7X8 197 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 MUC7Q8TAX7 377 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 UBALD1Q8TB05 177 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF418Q8TF45 676 aaPredicted RBP2.29□□□□□ -2.04
ITGB1-208ENST00000464001 HIST1H2BLQ99880 126 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 ADAT1Q9BUB4 502 aaKnown RBP2.29□□□□□ -2.04
ITGB1-208ENST00000464001 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 BANF2Q9H503 90 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 NIT2Q9NQR4 276 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 MARCOQ9UEW3 520 aaPredicted RBP2.29□□□□□ -2.04
ITGB1-208ENST00000464001 EPDR1Q9UM22 224 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF443Q9Y2A4 671 aaPredicted RBP2.29□□□□□ -2.04
ITGB1-208ENST00000464001 CCDC88CQ9P219 2028 aa2.29□□□□□ -2.04
ITGB1-208ENST00000464001 GRIN2AQ12879 1464 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 ARHGAP31Q2M1Z3 1444 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 FAM135BQ49AJ0 1406 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 IGLV4-60A0A075B6I1 120 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 TRAV13-1A0A0B4J241 112 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 FAM236AA0A1B0GUQ0 79 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 FAM236BA0A1B0GV22 79 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 SPAARA0A1B0GVQ0 90 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 C16orf90A8MZG2 172 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 H3BT86 120 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 UBFD1O14562 309 aaKnown RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 NPFFO15130 113 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 NPYP01303 97 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 IGLV7-43P04211 117 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 GPX1P07203 203 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF728P0DKX0 622 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 RPL22P35268 128 aaKnown RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 RPL35P42766 123 aaKnown RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 EIF2B2P49770 351 aaKnown RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 NDUFA6P56556 154 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 AKR1C1Q04828 323 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF816Q0VGE8 651 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 MIAQ16674 131 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 C22orf39Q6P5X5 142 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 SOSTDC1Q6X4U4 206 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 PHF5AQ7RTV0 110 aaKnown RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 LYZL2Q7Z4W2 148 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 FGF13Q92913 245 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 IMMP2LQ96T52 175 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 MIEN1Q9BRT3 115 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF471Q9BX82 626 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-208ENST00000464001 NPCDR1Q9BY65 106 aa2.28□□□□□ -2.04
ITGB1-208ENST00000464001 BCORL1Q5H9F3 1711 aa2.28□□□□□ -2.05
ITGB1-208ENST00000464001 ALPK3Q96L96 1907 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 HIVEP2P31629 2446 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 PHIPQ8WWQ0 1821 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 IGLV4-69A0A075B6H9 119 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 GRIFINA4D1Z8 144 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 ZNF670-ZNF695F2Z2N8 137 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 H3BMG7 143 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 C3orf84H3BNL1 204 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 NDUFB3O43676 98 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 TCRAP04437 139 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 DEFA4P12838 97 aa2.27□□□□□ -2.05
ITGB1-208ENST00000464001 CRYGSP22914 178 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms