RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
SNRNP40-203ENST00000463988 IGHV4-4A0A075B6R2 117 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 TMEM189A5PLL7 270 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF705FA8MVS1 300 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 PRSS46E5RG02 174 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 ISLRO14498 428 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 SYNGR2O43760 224 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 PPP1R1AQ13522 171 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 OR2F1Q13607 317 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 GDF5OSQ5U4N7 250 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 CCDC190Q86UF4 302 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 PPP1R14BQ96C90 147 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 CELA1Q9UNI1 258 aa10.33□□□□□ -0.76
SNRNP40-203ENST00000463988 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 AMBPP02760 352 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 S100A7P31151 101 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 MEOX2P50222 304 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 PAX9P55771 341 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 COQ8AQ8NI60 647 aa10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 PAIP2BQ9ULR5 123 aaKnown RBP10.32□□□□□ -0.76
SNRNP40-203ENST00000463988 GALR1P47211 349 aa10.31□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF709Q8N972 641 aa10.31□□□□□ -0.76
SNRNP40-203ENST00000463988 BPIFCQ8NFQ6 507 aa10.31□□□□□ -0.76
SNRNP40-203ENST00000463988 OR4D5Q8NGN0 318 aa10.31□□□□□ -0.76
SNRNP40-203ENST00000463988 MAGT1Q9H0U3 335 aa10.31□□□□□ -0.76
SNRNP40-203ENST00000463988 DNAH6Q9C0G6 4158 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF701M0R085 212 aaPredicted RBP10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 WRBO00258 174 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 HOXB5P09067 269 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 DEFB1P60022 68 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 PSG9Q00887 426 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 ID3Q02535 119 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 SPANXN2Q5MJ10 180 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 OR4B1Q8NGF8 309 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 GPR82Q96P67 336 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 RPRMQ9NS64 109 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 STRAPQ9Y3F4 350 aaKnown RBP10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 RFNGQ9Y644 331 aa10.3□□□□□ -0.76
SNRNP40-203ENST00000463988 A0A0J9YX75 114 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 NAP1L6A6NFF2 107 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF98A6NK75 572 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 SPANXN5Q5MJ07 72 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 SRRQ9GZT4 340 aa10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
SNRNP40-203ENST00000463988 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 A8MTW9 85 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 NDUFB6O95139 128 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 FXYD7P58549 80 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 FAM78BQ5VT40 261 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 ZNF767PQ75MW2 155 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 TMEM144Q7Z5S9 345 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 OR1B1Q8NGR6 318 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 FAM210BQ96KR6 192 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 RSG1Q9BU20 258 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 NDUFAF3Q9BU61 184 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 SLC25A32Q9H2D1 315 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 GOLT1BQ9Y3E0 138 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
SNRNP40-203ENST00000463988 F6UB75 175 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 P0DMU3 169 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 ORM2P19652 201 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 AKR1C1Q04828 323 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 OXA1LQ15070 435 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 TMEM182Q6ZP80 229 aaPredicted RBP10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 ACOT7LQ6ZUV0 252 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 SLC35B3Q9H1N7 401 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 SLC25A22Q9H936 323 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 DOK5Q9P104 306 aa10.27□□□□□ -0.77
SNRNP40-203ENST00000463988 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 H3BP45 60 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 ADAP1O75689 374 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 IFNA21P01568 189 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 INPP1P49441 399 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 EMP1P54849 157 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 C1orf158Q8N1D5 194 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 C20orf173Q96LM9 149 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 DKK2Q9UBU2 259 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 HERC2O95714 4834 aa10.26□□□□□ -0.77
SNRNP40-203ENST00000463988 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 HBE1P02100 147 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 OR4E1P0C645 316 aa10.25□□□□□ -0.77
SNRNP40-203ENST00000463988 PLP1P60201 277 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms