RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 COQ8AQ8NI60 647 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 MCUBQ9NWR8 336 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 DKK2Q9UBU2 259 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 SCP2D1Q9UJQ7 156 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
COL7A1-204ENST00000462475 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 F6UB75 175 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 OR1S1Q8NH92 325 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 SCGB3A2Q96PL1 93 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 PFDN2Q9UHV9 154 aa11.47□□□□□ -0.57
COL7A1-204ENST00000462475 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 IAPPP10997 89 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.57
COL7A1-204ENST00000462475 SRPXP78539 464 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 PPP1R14BQ96C90 147 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 CCDC59Q9P031 241 aaKnown RBP11.46□□□□□ -0.57
COL7A1-204ENST00000462475 RABL2AQ9UBK7 228 aaPredicted RBP11.46□□□□□ -0.57
COL7A1-204ENST00000462475 RABL2BQ9UNT1 228 aa11.46□□□□□ -0.57
COL7A1-204ENST00000462475 IGLV2-18A0A075B6J9 118 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 SNRPGP15A8MWD9 76 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 ISLRO14498 428 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 ANXA3P12429 323 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 HTN3P15516 51 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 PAX9P55771 341 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 PSG9Q00887 426 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 FAM78BQ5VT40 261 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 TRGV9Q99603 122 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 NIPSNAP3BQ9BS92 247 aa11.45□□□□□ -0.58
COL7A1-204ENST00000462475 A0A0J9YX75 114 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 TEX48A0A1B0GUV7 120 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 PITX3O75364 302 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 FABP1P07148 127 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 SPATA31B1PQ5VZV4 182 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 C17orf77Q96MU5 243 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 PAIP2BQ9ULR5 123 aaKnown RBP11.44□□□□□ -0.58
COL7A1-204ENST00000462475 GOLT1BQ9Y3E0 138 aa11.44□□□□□ -0.58
COL7A1-204ENST00000462475 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
COL7A1-204ENST00000462475 LOC102723971A0A1B0GUV8 181 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 IFNA21P01568 189 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 HBE1P02100 147 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 MED14OSP0DP75 135 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 Q6ZR54 194 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 TMED4Q7Z7H5 227 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 SOSTQ9BQB4 213 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 C7orf50Q9BRJ6 194 aaKnown RBP11.43□□□□□ -0.58
COL7A1-204ENST00000462475 SLC25A32Q9H2D1 315 aa11.43□□□□□ -0.58
COL7A1-204ENST00000462475 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 RAB11AP62491 216 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
COL7A1-204ENST00000462475 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 DOK5Q9P104 306 aa11.42□□□□□ -0.58
COL7A1-204ENST00000462475 A8MTW9 85 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 TNFSF8P32971 234 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 MEOX2P50222 304 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 OXA1LQ15070 435 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 RRN3P1Q2M238 152 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 LINC00299Q6ZSB3 139 aa11.41□□□□□ -0.58
COL7A1-204ENST00000462475 FABP12A6NFH5 140 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 ZNF98A6NK75 572 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 VAMP1P23763 118 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 GATA2P23769 480 aaPredicted RBP11.4□□□□□ -0.58
COL7A1-204ENST00000462475 GALR1P47211 349 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 TMEM88Q6PEY1 159 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 TMEM182Q6ZP80 229 aaPredicted RBP11.4□□□□□ -0.58
COL7A1-204ENST00000462475 TRIM63Q969Q1 353 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 IGF2BP2-AS1Q96M15 143 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 RSG1Q9BU20 258 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
COL7A1-204ENST00000462475 DAD1P61803 113 aa11.39□□□□□ -0.59
COL7A1-204ENST00000462475 TMEM128Q5BJH2 165 aa11.39□□□□□ -0.59
COL7A1-204ENST00000462475 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
COL7A1-204ENST00000462475 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
COL7A1-204ENST00000462475 SLC45A2Q9UMX9 530 aa11.39□□□□□ -0.59
COL7A1-204ENST00000462475 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
COL7A1-204ENST00000462475 H3BP45 60 aa11.38□□□□□ -0.59
COL7A1-204ENST00000462475 WRBO00258 174 aa11.38□□□□□ -0.59
COL7A1-204ENST00000462475 MED6O75586 246 aa11.38□□□□□ -0.59
COL7A1-204ENST00000462475 CFDP00746 253 aaPredicted RBP11.38□□□□□ -0.59
COL7A1-204ENST00000462475 PRM2P04554 102 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms