RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IL5P05113 134 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 ORM2P19652 201 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 PVALBP20472 110 aaPredicted RBP11.33□□□□□ -0.6
VARS-219ENST00000461328 PAX9P55771 341 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 DLK1P80370 383 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 TMEM14EPQ6UXP3 125 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 C2orf50Q96LR7 162 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 TMEM147Q9BVK8 224 aa11.33□□□□□ -0.6
VARS-219ENST00000461328 C7orf66A4D0T2 115 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 K7EPK0 472 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
VARS-219ENST00000461328 S100A7P31151 101 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 CAV2P51636 162 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 IFITM3Q01628 133 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 CYP2G1PQ6ZSU1 146 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 OR8I2Q8N0Y5 310 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 RNF183Q96D59 192 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 SLC25A22Q9H936 323 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 DOK5Q9P104 306 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 TENM2Q9NT68 2774 aa11.32□□□□□ -0.6
VARS-219ENST00000461328 RYR3Q15413 4870 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
VARS-219ENST00000461328 INMT-MINDY4F8WBC2 141 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 GOSR2O14653 212 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 PRAF2O60831 178 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 LINC00869P0C866 280 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 GALR1P47211 349 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 RAP2BP61225 183 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
VARS-219ENST00000461328 NPVFQ9HCQ7 196 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
VARS-219ENST00000461328 DYNC2H1Q8NCM8 4307 aaKnown RBP11.29□□□□□ -0.6
VARS-219ENST00000461328 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 JTBO76095 146 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 OR5G3P0C626 314 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 ID1P41134 155 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 SELENOTP62341 195 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
VARS-219ENST00000461328 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 LINC00052Q96N35 136 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
VARS-219ENST00000461328 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 CST7O76096 145 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 SPP1P10451 314 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 ARL16Q0P5N6 197 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 RAB32Q13637 225 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 ZNF546Q86UE3 836 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
VARS-219ENST00000461328 SEPSECSQ9HD40 501 aaKnown RBP11.28□□□□□ -0.6
VARS-219ENST00000461328 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 HYPMO75409 117 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 PSMB3P49720 205 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 MORN3Q6PF18 240 aaPredicted RBP11.27□□□□□ -0.61
VARS-219ENST00000461328 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 STX12Q86Y82 276 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 RARRES2Q99969 163 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
VARS-219ENST00000461328 H3BRN7 92 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 SSNA1O43805 119 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 DEDDO75618 318 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 SIX6O95475 246 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 MEOX2P50222 304 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
VARS-219ENST00000461328 TMEM41BQ5BJD5 291 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 GPR82Q96P67 336 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 SLC25A39Q9BZJ4 359 aaPredicted RBP11.26□□□□□ -0.61
VARS-219ENST00000461328 ARL6Q9H0F7 186 aa11.26□□□□□ -0.61
VARS-219ENST00000461328 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
VARS-219ENST00000461328 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 ISLRO14498 428 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 AGPAT2O15120 278 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
VARS-219ENST00000461328 C4BPBP20851 252 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 HBG1P69891 147 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 HBG2P69892 147 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 FGL1Q08830 312 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 RAB31Q13636 194 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 LRRC37A5PQ49AS3 106 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 RSG1Q9BU20 258 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
VARS-219ENST00000461328 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms