RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 L7N2F9 121 aa16.52■□□□□ 0.24
TRAF4-207ENST00000461195 RRAS2P62070 204 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-207ENST00000461195 SNRPD3P62318 126 aaKnown RBP16.52■□□□□ 0.24
TRAF4-207ENST00000461195 VAMP2P63027 116 aa16.52■□□□□ 0.24
TRAF4-207ENST00000461195 PSMG4Q5JS54 123 aa16.52■□□□□ 0.24
TRAF4-207ENST00000461195 SLC45A2Q9UMX9 530 aa16.52■□□□□ 0.24
TRAF4-207ENST00000461195 FNDC10F2Z333 226 aa16.51■□□□□ 0.23
TRAF4-207ENST00000461195 CA1P00915 261 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-207ENST00000461195 GATA2P23769 480 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-207ENST00000461195 GSG1LQ6UXU4 331 aa16.51■□□□□ 0.23
TRAF4-207ENST00000461195 TMEM182Q6ZP80 229 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-207ENST00000461195 CYP2G1PQ6ZSU1 146 aa16.51■□□□□ 0.23
TRAF4-207ENST00000461195 GATAD1Q8WUU5 269 aa16.51■□□□□ 0.23
TRAF4-207ENST00000461195 MGAT4CQ9UBM8 478 aa16.51■□□□□ 0.23
TRAF4-207ENST00000461195 LSM5Q9Y4Y9 91 aaKnown RBP16.51■□□□□ 0.23
TRAF4-207ENST00000461195 CSMD3Q7Z407 3707 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 KNCNA6PVL3 124 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 K7EPK0 472 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 ORM2P19652 201 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 TRPT1Q86TN4 253 aaKnown RBP16.5■□□□□ 0.23
TRAF4-207ENST00000461195 OR8I2Q8N0Y5 310 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 GPN1Q9HCN4 374 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-207ENST00000461195 NPVFQ9HCQ7 196 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 AGRNO00468 2067 aa16.5■□□□□ 0.23
TRAF4-207ENST00000461195 SACSQ9NZJ4 4579 aa16.49■□□□□ 0.23
TRAF4-207ENST00000461195 S100A7P31151 101 aa16.49■□□□□ 0.23
TRAF4-207ENST00000461195 ACTL10Q5JWF8 245 aa16.49■□□□□ 0.23
TRAF4-207ENST00000461195 TMEM147Q9BVK8 224 aa16.49■□□□□ 0.23
TRAF4-207ENST00000461195 A0A0J9YWU9 116 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 SPP1P10451 314 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 SELENOTP62341 195 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 NRARPQ7Z6K4 114 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 OR1B1Q8NGR6 318 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 GGACTQ9BVM4 153 aa16.48■□□□□ 0.23
TRAF4-207ENST00000461195 ZNF98A6NK75 572 aa16.47■□□□□ 0.23
TRAF4-207ENST00000461195 PVALBP20472 110 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-207ENST00000461195 BCAP31P51572 246 aa16.47■□□□□ 0.23
TRAF4-207ENST00000461195 ARL16Q0P5N6 197 aa16.47■□□□□ 0.23
TRAF4-207ENST00000461195 MORN3Q6PF18 240 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-207ENST00000461195 TEPPQ6URK8 271 aa16.47■□□□□ 0.23
TRAF4-207ENST00000461195 DEDDO75618 318 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 ID1P41134 155 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 CAV2P51636 162 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 DEFA1P59665 94 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 DEFA3P59666 94 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 S100A10P60903 97 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 TMEM41BQ5BJD5 291 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 RARRES2Q99969 163 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 C11orf1Q9H5F2 150 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 SLC25A22Q9H936 323 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 STARD9Q9P2P6 4700 aa16.46■□□□□ 0.23
TRAF4-207ENST00000461195 INMT-MINDY4F8WBC2 141 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 PRAF2O60831 178 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 LINC00869P0C866 280 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 GALR1P47211 349 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 IL15RAQ13261 267 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 OR11H2Q8NH07 326 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 SLC25A32Q9H2D1 315 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 DOK5Q9P104 306 aa16.45■□□□□ 0.22
TRAF4-207ENST00000461195 EPPK1P58107 5090 aaKnown RBP16.44■□□□□ 0.22
TRAF4-207ENST00000461195 HYPMO75409 117 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 PSMB3P49720 205 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 PLP1P60201 277 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 RAP2BP61225 183 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 RAB32Q13637 225 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 SAMD13Q5VXD3 122 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 TMEM217Q8N7C4 229 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 GPR82Q96P67 336 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 HIGD1AQ9Y241 93 aa16.44■□□□□ 0.22
TRAF4-207ENST00000461195 LYSTQ99698 3801 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 FAM24AA6NFZ4 105 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 SOCS3O14543 225 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 GIG44P09565 113 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-207ENST00000461195 ATF4P18848 351 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-207ENST00000461195 MEOX2P50222 304 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 SLC38A11Q08AI6 406 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 LINC00052Q96N35 136 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 MARVELD1Q9BSK0 173 aa16.43■□□□□ 0.22
TRAF4-207ENST00000461195 SLC25A39Q9BZJ4 359 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-207ENST00000461195 H3BMM0 161 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 H3BRN7 92 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 ISLRO14498 428 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 CST7O76096 145 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 OR5G3P0C626 314 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 C4BPBP20851 252 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 EWSR1Q01844 656 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■■■□ 23.3
TRAF4-207ENST00000461195 S100A7AQ86SG5 101 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 ZNF546Q86UE3 836 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 SHANK2-AS3Q9BTD1 123 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 RSG1Q9BU20 258 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 SCRT1Q9BWW7 348 aa16.42■□□□□ 0.22
TRAF4-207ENST00000461195 LYRM2Q9NU23 88 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-207ENST00000461195 GOSR2O14653 212 aa16.41■□□□□ 0.22
TRAF4-207ENST00000461195 AGPAT2O15120 278 aa16.41■□□□□ 0.22
TRAF4-207ENST00000461195 HLA-DRB4P13762 266 aa16.41■□□□□ 0.22
TRAF4-207ENST00000461195 ARL6Q9H0F7 186 aa16.41■□□□□ 0.22
TRAF4-207ENST00000461195 HLA-DRB4X5D2U9 266 aa16.41■□□□□ 0.22
TRAF4-207ENST00000461195 NUTF2P61970 127 aaKnown RBP16.4■□□□□ 0.22
TRAF4-207ENST00000461195 PXDC1Q5TGL8 231 aa16.4■□□□□ 0.22
TRAF4-207ENST00000461195 C16orf92Q96LL3 132 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms