RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SMPXQ9UHP9 88 aa12.49□□□□□ -0.41
TOP3A-202ENST00000461127 STRAPQ9Y3F4 350 aaKnown RBP12.49□□□□□ -0.41
TOP3A-202ENST00000461127 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 IGLC7A0M8Q6 106 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 INS-IGF2F8WCM5 200 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 H3BP45 60 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 TSC22D2O75157 780 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 TMEM50AO95807 157 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 HTR2BP41595 481 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-202ENST00000461127 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 SLC24A4Q8NFF2 622 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 HYLS1Q96M11 299 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 ATP6V0BQ99437 205 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 RHPN1-AS1Q9BWJ2 59 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 U3KQ87 197 aa12.48□□□□□ -0.41
TOP3A-202ENST00000461127 DEFB131BA0A096LNP1 70 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 ARPC5O15511 151 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 CDK2AP2O75956 126 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
TOP3A-202ENST00000461127 RBMY1A1P0DJD3 496 aaKnown RBP12.47□□□□□ -0.41
TOP3A-202ENST00000461127 RBMY1CP0DJD4 496 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 PAX9P55771 341 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 RBMY1FQ15415 496 aaKnown RBP12.47□□□□□ -0.41
TOP3A-202ENST00000461127 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 NOXA1Q86UR1 476 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 SLC25A31Q9H0C2 315 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 C11orf1Q9H5F2 150 aa12.47□□□□□ -0.41
TOP3A-202ENST00000461127 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-202ENST00000461127 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 CHEK1O14757 476 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 NPY1RP25929 384 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 ATP5IP56385 69 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-202ENST00000461127 RAB11AP62491 216 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 SLC25A24Q6NUK1 477 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 STX12Q86Y82 276 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 STHQ8IWL8 128 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 OR11H4Q8NGC9 324 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 CHRDL1Q9BU40 450 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 C21orf62Q9NYP8 219 aa12.46□□□□□ -0.41
TOP3A-202ENST00000461127 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
TOP3A-202ENST00000461127 BOLA2-SMG1P6H3BVE0 249 aa12.45□□□□□ -0.42
TOP3A-202ENST00000461127 CD5P06127 495 aa12.45□□□□□ -0.42
TOP3A-202ENST00000461127 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
TOP3A-202ENST00000461127 UBE2DNLQ8IWF7 75 aa12.45□□□□□ -0.42
TOP3A-202ENST00000461127 TNFSF18Q9UNG2 199 aa12.45□□□□□ -0.42
TOP3A-202ENST00000461127 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 DFFBO76075 338 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
TOP3A-202ENST00000461127 EIF2B2P49770 351 aaKnown RBP12.44□□□□□ -0.42
TOP3A-202ENST00000461127 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-202ENST00000461127 RELQ04864 619 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-202ENST00000461127 C2orf83Q53S99 150 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 Q56UQ5 140 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 ACOT7LQ6ZUV0 252 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 TMEM252Q8N6L7 170 aa12.44□□□□□ -0.42
TOP3A-202ENST00000461127 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
TOP3A-202ENST00000461127 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-202ENST00000461127 CST7O76096 145 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 YIF1AO95070 293 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 SULT1A1P50225 295 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 DEFB131AP59861 70 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 BAXQ07812 192 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 LEMD1Q68G75 181 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 OR8G2PQ6IF36 304 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 ZNF114Q8NC26 417 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 OR1P1Q8NH06 330 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 AQP10Q96PS8 301 aa12.43□□□□□ -0.42
TOP3A-202ENST00000461127 ELOA3CA0A087WX78 387 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-202ENST00000461127 IGHV3-49A0A0A0MS15 119 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-202ENST00000461127 NKX2-5P52952 324 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-202ENST00000461127 HBG1P69891 147 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 HBG2P69892 147 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 OR2F1Q13607 317 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 C1orf134Q5TEV5 83 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 Q6ZR54 194 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 TCF24Q7RTU0 167 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 OR10P1Q8NGE3 313 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 HSPB11Q9Y547 144 aa12.42□□□□□ -0.42
TOP3A-202ENST00000461127 A0A0D9SG52 128 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 RNF222A6NCQ9 220 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 NUPL2O15504 423 aaKnown RBP12.41□□□□□ -0.42
TOP3A-202ENST00000461127 SPP1P10451 314 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 MORN3Q6PF18 240 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-202ENST00000461127 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 RNASEH2CQ8TDP1 164 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms