RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PECRQ9BY49 303 aa1.88□□□□□ -2.11
HPS3-203ENST00000460822 TAF9BQ9HBM6 251 aa1.88□□□□□ -2.11
HPS3-203ENST00000460822 C21orf62Q9NYP8 219 aa1.88□□□□□ -2.11
HPS3-203ENST00000460822 OR5AC2Q9NZP5 309 aa1.88□□□□□ -2.11
HPS3-203ENST00000460822 PCYT1BQ9Y5K3 369 aaPredicted RBP1.88□□□□□ -2.11
HPS3-203ENST00000460822 IER3IP1Q9Y5U9 82 aa1.88□□□□□ -2.11
HPS3-203ENST00000460822 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
HPS3-203ENST00000460822 MKI67P46013 3256 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 A0A1B0GWA3 101 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TMEM235A6NFC5 223 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TMEM212A6NML5 194 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 A8MWL6 223 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 UMAD1C9J7I0 102 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BKO60814 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 CXorf1O96002 111 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BJP06899 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 CXCL1P09341 107 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 OR4A8P0C604 315 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BOP23527 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 CRABP1P29762 137 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BBP33778 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 ZNF83P51522 516 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BDP58876 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BCP62807 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 EIF5AP63241 154 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 BIKQ13323 160 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 OR8G1Q15617 311 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 GUK1Q16774 197 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST2H2BEQ16778 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 KHDC3LQ587J8 217 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TMEM215Q68D42 235 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 EIF5AL1Q6IS14 154 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 MORN3Q6PF18 240 aaPredicted RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 Q6ZRU5 148 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 DPPA2Q7Z7J5 298 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 LRRC25Q8N386 305 aaPredicted RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 ZNF676Q8N7Q3 588 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 SLC35G3Q8N808 338 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 MFSD8Q8NHS3 518 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 Q8WTZ3 238 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 MAFIPQ8WZ33 124 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BHQ93079 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 MUCL1Q96DR8 90 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 MS4A6EQ96DS6 147 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 S100A13Q99584 98 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BNQ99877 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST1H2BMQ99879 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 GNB1LQ9BYB4 327 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 ULBP3Q9BZM4 244 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 PCBD2Q9H0N5 130 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 PRO1933Q9H354 126 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 ZNF430Q9H8G1 570 aaPredicted RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 C2orf16Q68DN1 1984 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 A0A087WUJ7 227 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 SMIM9A6NGZ8 99 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 A8MWP6 167 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 SFT2D2O95562 160 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 CD28P10747 220 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 CTSEP14091 401 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 FABP4P15090 132 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 RPS27P42677 84 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 S100A10P60903 97 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 SUPT4H1P63272 117 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 TNFRSF9Q07011 255 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 IL15RAQ13261 267 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 ELOBQ15370 118 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 SLC9A3R2Q15599 337 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 KRTAP13-3Q3SY46 172 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TRMT12Q53H54 448 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 TMEM128Q5BJH2 165 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 GLYATL3Q5SZD4 288 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 HIST2H3PS2Q5TEC6 136 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 NEGR1Q7Z3B1 354 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TRAPPC6BQ86SZ2 158 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 ZNF615Q8N8J6 731 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 AQP3Q92482 292 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 GPX7Q96SL4 187 aaPredicted RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 AMELYQ99218 206 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 EIF5A2Q9GZV4 153 aaKnown RBP1.87□□□□□ -2.11
HPS3-203ENST00000460822 SLC35B3Q9H1N7 401 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 TAS2R4Q9NYW5 299 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 LINC00527Q9UJ94 153 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 MMACHCQ9Y4U1 282 aa1.87□□□□□ -2.11
HPS3-203ENST00000460822 A0A087WWC5 75 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 IGHV1-45A0A0A0MS14 117 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 A0A1B0GW64 132 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ZNF727A8MUV8 499 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 H7C1C5 153 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 K7EPK0 472 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TRGC2P03986 189 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 TRGC1P0CF51 173 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 OR13C7P0DN81 318 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 GZMBP10144 247 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 FGF7P21781 194 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 PPP1CCP36873 323 aaKnown RBP1.86□□□□□ -2.11
HPS3-203ENST00000460822 LCN6P62502 163 aa1.86□□□□□ -2.11
HPS3-203ENST00000460822 ZNF616Q08AN1 781 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms