RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 GATAD1Q8WUU5 269 aa8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 DUX3Q96PT4 197 aa8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 PSMG3Q9BT73 122 aaPredicted RBP8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 MRPL36Q9P0J6 103 aaKnown RBP8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 HIGD1AQ9Y241 93 aa8.43□□□□□ -1.06
SMNDC1-203ENST00000460483 IGKV1D-37A0A075B6S9 117 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 TRAV25A0A0B4J276 109 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 IGHV3-35A0A0C4DH35 117 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 WI2-2373I1.2A0A1W2PRP0 233 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 G3V3Q6 166 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 BCL2L11O43521 198 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 OR5G3P0C626 314 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 FOLR2P14207 255 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 MEOX2P50222 304 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 OPCMLQ14982 345 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 ACOT6Q3I5F7 207 aaPredicted RBP8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 LCN12Q6JVE5 192 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 RBPMS2Q6ZRY4 209 aaKnown RBP8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 STPG3Q8N7X2 389 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 STXBP6Q8NFX7 210 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 OR1B1Q8NGR6 318 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 MGST2Q99735 147 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 GGTLC1Q9BX51 225 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 DNAJC4Q9NNZ3 241 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 SLC39A9Q9NUM3 307 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 PXMP4Q9Y6I8 212 aa8.42□□□□□ -1.06
SMNDC1-203ENST00000460483 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 C8orf88P0DMB2 117 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 CRYBB3P26998 211 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 C10orf113Q5VZT2 155 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 OR11H4Q8NGC9 324 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 COL6A5A8TX70 2615 aa8.41□□□□□ -1.06
SMNDC1-203ENST00000460483 A0A1W2PPV4 95 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 TMEM213A2RRL7 107 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 UMAD1C9J7I0 102 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 RPL7P18124 248 aaKnown RBP8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 GALR1P47211 349 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 TAS2R45P59539 299 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 RHOBP62745 196 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 RPL11P62913 178 aaKnown RBP8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 TM4SF20Q53R12 229 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 UNQ9165/PRO28630Q6UXU0 137 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 OR8I2Q8N0Y5 310 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
SMNDC1-203ENST00000460483 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 TET2Q6N021 2002 aaPredicted RBP8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 CSN3P07498 182 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 M6PRP20645 277 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 AKR1C8PQ5T2L2 129 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 MIC13Q5XKP0 118 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 BPIFA4PQ86YQ2 179 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 BAP18Q8IXM2 172 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 OR2G3Q8NGZ4 309 aa8.39□□□□□ -1.07
SMNDC1-203ENST00000460483 OR4C46A6NHA9 309 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 TEX46H3BTG2 121 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 BUB3O43684 328 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 CXCL2P19875 107 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 ATP6V0CP27449 155 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 RAB5CP51148 216 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 USF2Q15853 346 aaPredicted RBP8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 LGALSLQ3ZCW2 172 aaPredicted RBP8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 LINC00305Q7Z4B0 112 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 SPAG8Q99932 426 aaPredicted RBP8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 SHANK2-AS3Q9BTD1 123 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 SLC25A39Q9BZJ4 359 aaPredicted RBP8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 VSIRQ9H7M9 311 aa8.38□□□□□ -1.07
SMNDC1-203ENST00000460483 TRAV2A0A0B4J234 112 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 ZNF98A6NK75 572 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 DNASE2O00115 360 aaPredicted RBP8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 CHEK1O14757 476 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 ZNF207O43670 478 aaKnown RBP8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 GUK1Q16774 197 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 DEFB114Q30KQ6 69 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 FAM78BQ5VT40 261 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 GTSCR1Q86UQ5 136 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 OR10G4Q8NGN3 311 aa8.37□□□□□ -1.07
SMNDC1-203ENST00000460483 OR10G9Q8NGN4 311 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms