RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	TEPP	Q6URK8	271 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	WFDC3	Q8IUB2	231 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	APRG1	Q8IVJ8	170 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	BPIFC	Q8NFQ6	507 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	CHAC2	Q8WUX2	184 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	TMEM147	Q9BVK8	224 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	SCRT1	Q9BWW7	348 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	GGTLC1	Q9BX51	225 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	SRD5A3	Q9H8P0	318 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	MAP6D1	Q9H9H5	199 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	WFDC1	Q9HC57	220 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783	UQCC1	Q9NVA1	299 aa		7.61	□□□□□ -1.19
MRPL55-223	ENST00000459783		H3BRN7	92 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	RLN2	P04090	185 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	FABP1	P07148	127 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	S100A11	P31949	105 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	PRR20E	P86478	221 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	PRR20C	P86479	221 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	PRR20D	P86480	221 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	PRR20B	P86481	221 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	PRR20A	P86496	221 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	CLINT1	Q14677	625 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	OPCML	Q14982	345 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	HAGH	Q16775	308 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	MIC13	Q5XKP0	118 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	STX12	Q86Y82	276 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	STXBP6	Q8NFX7	210 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	OR5C1	Q8NGR4	320 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	OR1B1	Q8NGR6	318 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	UHRF2	Q96PU4	802 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	SLC25A32	Q9H2D1	315 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	TMEM231	Q9H6L2	316 aa		7.6	□□□□□ -1.19
MRPL55-223	ENST00000459783	DNAH9	Q9NYC9	4486 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	TRAV2	A0A0B4J234	112 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	ZNF98	A6NK75	572 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SOCS3	O14543	225 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	GIP	P09681	153 aa	Predicted RBP	7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	BMI1	P35226	326 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	CAMLG	P49069	296 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SELENOT	P62341	195 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	RPL11	P62913	178 aa	Known RBP	7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SIGLEC15	Q6ZMC9	328 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	ZNF546	Q86UE3	836 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	THAP6	Q8TBB0	222 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	TMEM37	Q8WXS4	190 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	GRAMD2B	Q96HH9	432 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	FAM110A	Q9BQ89	295 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	TM2D3	Q9BRN9	247 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SHANK2-AS3	Q9BTD1	123 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	SLC25A31	Q9H0C2	315 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	HSPB11	Q9Y547	144 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	RFNG	Q9Y644	331 aa		7.59	□□□□□ -1.19
MRPL55-223	ENST00000459783	TENM3	Q9P273	2699 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	MRPS12	O15235	138 aa	Known RBP	7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	HYPM	O75409	117 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	CFD	P00746	253 aa	Predicted RBP	7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	CD5	P06127	495 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	ZNF688	P0C7X2	276 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	FGF7	P21781	194 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	RPL12	P30050	165 aa	Known RBP	7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	DEFB131A	P59861	70 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	DEFB1	P60022	68 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	HBG1	P69891	147 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	HBG2	P69892	147 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	BAX	Q07812	192 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	ATP6V1F	Q16864	119 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	GCSAML	Q5JQS6	135 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	C1orf194	Q5T5A4	169 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	NARS2	Q96I59	477 aa	Known RBP	7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	SMIM3	Q9BZL3	60 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	ARL6	Q9H0F7	186 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	TUBA4B	Q9H853	241 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	RETN	Q9HD89	108 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	NRN1	Q9NPD7	142 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	HIGD1A	Q9Y241	93 aa		7.58	□□□□□ -1.2
MRPL55-223	ENST00000459783	RNF222	A6NCQ9	220 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	HELT	A6NFD8	242 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	SMLR1	H3BR10	107 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	DNASE2	O00115	360 aa	Predicted RBP	7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	OR5G3	P0C626	314 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	PET100	P0DJ07	73 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	RPL29	P47914	159 aa	Known RBP	7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	RAP2B	P61225	183 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	PPP1R14B	Q96C90	147 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	NPCDR1	Q9BY65	106 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	WDR61	Q9GZS3	305 aa	Known RBP	7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	ARV1	Q9H2C2	271 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	SLC25A22	Q9H936	323 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	SLC39A9	Q9NUM3	307 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	PXMP4	Q9Y6I8	212 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	COL7A1	Q02388	2944 aa		7.57	□□□□□ -1.2
MRPL55-223	ENST00000459783	TRAV8-2	A0A0B4J237	113 aa		7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	TRAV5	A0A0B4J249	113 aa		7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	KNCN	A6PVL3	124 aa		7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	RPL35A	P18077	110 aa	Known RBP	7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	NUP62	P37198	522 aa	Predicted RBP	7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	PAFAH1B2	P68402	229 aa		7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.56	□□□□□ -1.2
MRPL55-223	ENST00000459783	OR8I2	Q8N0Y5	310 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms