RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 HYDINQ4G0P3 5121 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 SMIM23A6NLE4 172 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 MYH7BA7E2Y1 1941 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 ARHGEF11O15085 1522 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 PIK3C2GO75747 1445 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 C8GP07360 202 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 SMIM17P0DL12 118 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 OMPP47874 163 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 FOXA3P55318 350 aaPredicted RBP0□□□□□ -2.41
SCARNA18-201ENST00000459004 EIF5AP63241 154 aaKnown RBP0□□□□□ -2.41
SCARNA18-201ENST00000459004 Q6ZS92 163 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 OR52L1Q8NGH7 329 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 SLC25A40Q8TBP6 338 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 CANT1Q8WVQ1 401 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 LYSMD1Q96S90 227 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 MED29Q9NX70 200 aa0□□□□□ -2.41
SCARNA18-201ENST00000459004 FAT3Q8TDW7 4589 aa-0□□□□□ -2.41
SCARNA18-201ENST00000459004 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 TTC28Q96AY4 2481 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 SNRNP200O75643 2136 aaKnown RBP-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 OBSL1O75147 1896 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 ANKRD17O75179 2603 aaKnown RBP-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 TRGV10A0A0A0MS01 117 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 TRAV10A0A0B4J240 114 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 H3BRM9 83 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 CD2P06729 351 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 SRP14P37108 136 aaKnown RBP-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 LYRM7Q5U5X0 104 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 TEN1Q86WV5 123 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 PCTPQ9UKL6 214 aa-0.01□□□□□ -2.41
SCARNA18-201ENST00000459004 SYNE1Q8NF91 8797 aaKnown RBP-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 A8MWV9 139 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 E7EUB6 86 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 F8W1H4 67 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 KPNA3O00505 521 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 ERC2-IT1O76042 136 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 SRIP30626 198 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 ZNF137PP52743 207 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 DSCR4P56555 118 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 ROMO1P60602 79 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 KRR1Q13601 381 aaKnown RBP-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 TRAPPC5Q8IUR0 188 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 PDZD9Q8IXQ8 264 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 OR5D14Q8NGL3 314 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 ZNF431Q8TF32 576 aaPredicted RBP-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 CCDC42Q96M95 316 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 YPEL2Q96QA6 119 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 TRIM4Q9C037 500 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 TMEM126AQ9H061 195 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 TMEM138Q9NPI0 162 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 GLTPQ9NZD2 209 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 JPT1Q9UK76 154 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 LY96Q9Y6Y9 160 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 HERC1Q15751 4861 aa-0.02□□□□□ -2.41
SCARNA18-201ENST00000459004 APCP25054 2843 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 KIF1BO60333 1816 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 A0A087WUJ7 227 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 SMIM9A6NGZ8 99 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 PDE6DO43924 150 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 COX7CP15954 63 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 KDELR1P24390 212 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 EDDM3AQ14507 147 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 C22orf39Q6P5X5 142 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 ATOH7Q8N100 152 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 OR51A2Q8NGJ7 313 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 OR10K1Q8NGX5 313 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 FAM103A1Q9BTL3 118 aaKnown RBP-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 RNASE7Q9H1E1 156 aaKnown RBP-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 MYH10P35580 1976 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 MAST4O15021 2626 aa-0.03□□□□□ -2.41
SCARNA18-201ENST00000459004 ZNF462Q96JM2 2506 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 FMN1Q68DA7 1419 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 NDUFB3O43676 98 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 SPINT3P49223 89 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 DEFA3P59666 94 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 HIST1H3AP68431 136 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 H3F3AP84243 136 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 C6orf52Q5T4I8 152 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 SLC25A21Q9BQT8 299 aaPredicted RBP-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 UCK1Q9HA47 277 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 UQCC1Q9NVA1 299 aa-0.04□□□□□ -2.42
SCARNA18-201ENST00000459004 TNCP24821 2201 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 CXCL8P10145 99 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 PIGPP57054 158 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 FXYD6P3P58550 94 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 RANP62826 216 aaKnown RBP-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 SPATA45Q537H7 98 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 Q8TAT8 98 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 STAG3L4Q8TBR4 150 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 MUCL1Q96DR8 90 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 ZC2HC1AQ96GY0 325 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 PBOV1Q9GZY1 135 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 WFDC10AQ9H1F0 79 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 PRELID3BQ9Y3B1 194 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 NAV3Q8IVL0 2385 aa-0.05□□□□□ -2.42
SCARNA18-201ENST00000459004 COL6A3P12111 3177 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 HERC2O95714 4834 aa-0.06□□□□□ -2.42
SCARNA18-201ENST00000459004 MYLKQ15746 1914 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms