RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 KANTRA0A1W2PQU2 76 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 CHEK1O14757 476 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 ORM2P19652 201 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 ATP6V0CP27449 155 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-211ENST00000458516 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 ZNF709Q8N972 641 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 VSIRQ9H7M9 311 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 KCNIP2Q9NS61 270 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 MLXQ9UH92 298 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 TIMM9Q9Y5J7 89 aa12.75□□□□□ -0.37
TRIM39-211ENST00000458516 HYPMO75409 117 aa12.74□□□□□ -0.37
TRIM39-211ENST00000458516 JTBO76095 146 aa12.74□□□□□ -0.37
TRIM39-211ENST00000458516 RHPN1-AS1Q9BWJ2 59 aa12.74□□□□□ -0.37
TRIM39-211ENST00000458516 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
TRIM39-211ENST00000458516 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
TRIM39-211ENST00000458516 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 WIPF1O43516 503 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 OR5G3P0C626 314 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 INSL3P51460 131 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 Q6ZRG5 221 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 DYNLRB2Q8TF09 96 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 TMEM37Q8WXS4 190 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 PSMG3Q9BT73 122 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-211ENST00000458516 ZNF471Q9BX82 626 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-211ENST00000458516 SH3BGRL3Q9H299 93 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 HIGD1AQ9Y241 93 aa12.73□□□□□ -0.37
TRIM39-211ENST00000458516 H3BRN7 92 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 BOLA2-SMG1P6H3BVE0 249 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 BUB3O43684 328 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 COX7A2P2O60397 106 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 DEFB114Q30KQ6 69 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 OR2G3Q8NGZ4 309 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
TRIM39-211ENST00000458516 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 RNF2Q99496 336 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 SLC25A39Q9BZJ4 359 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-211ENST00000458516 GPR61Q9BZJ8 451 aa12.72□□□□□ -0.37
TRIM39-211ENST00000458516 TECRQ9NZ01 308 aaKnown RBP12.72□□□□□ -0.37
TRIM39-211ENST00000458516 ELOA3CA0A087WX78 387 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-211ENST00000458516 A0A1W2PS18 150 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 BMI1P35226 326 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 CD300EQ496F6 205 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-211ENST00000458516 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 C10orf113Q5VZT2 155 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 C16orf54Q6UWD8 224 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 OR1L4Q8NGR5 311 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 GNPNAT1Q96EK6 184 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-211ENST00000458516 PFDN5Q99471 154 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 SHANK2-AS3Q9BTD1 123 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 SCRT1Q9BWW7 348 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 TMEM231Q9H6L2 316 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
TRIM39-211ENST00000458516 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 ZNF98A6NK75 572 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 G3V4G9 280 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 MORN5Q5VZ52 161 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 STOML3Q8TAV4 291 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 GATAD1Q8WUU5 269 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 SLC25A32Q9H2D1 315 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 SORL1Q92673 2214 aa12.7□□□□□ -0.38
TRIM39-211ENST00000458516 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 SPP1P10451 314 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 FAM90A2PQ658T7 463 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 LEMD1Q68G75 181 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 TMEM61Q8N0U2 210 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 GRAMD2BQ96HH9 432 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 PFDN2Q9UHV9 154 aa12.69□□□□□ -0.38
TRIM39-211ENST00000458516 S100A7P31151 101 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 RAB2AP61019 212 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
TRIM39-211ENST00000458516 SERF2P84101 59 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 C1orf194Q5T5A4 169 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 TCF24Q7RTU0 167 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
TRIM39-211ENST00000458516 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
TRIM39-211ENST00000458516 M6PRP20645 277 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 ACOT6Q3I5F7 207 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-211ENST00000458516 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 SLC51BQ86UW2 128 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
TRIM39-211ENST00000458516 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
TRIM39-211ENST00000458516 C4BPBP20851 252 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 EGFEM1PQ0D2K5 195 aa12.66□□□□□ -0.38
TRIM39-211ENST00000458516 FAM78BQ5VT40 261 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms