RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 NRARPQ7Z6K4 114 aa17.14■□□□□ 0.33
CBX3-204ENST00000456948 OR8I2Q8N0Y5 310 aa17.14■□□□□ 0.33
CBX3-204ENST00000456948 DCANP1Q8TF63 244 aa17.14■□□□□ 0.33
CBX3-204ENST00000456948 EDA2RQ9HAV5 297 aa17.14■□□□□ 0.33
CBX3-204ENST00000456948 SAMD13Q5VXD3 122 aa17.13■□□□□ 0.33
CBX3-204ENST00000456948 LEMD1Q68G75 181 aa17.13■□□□□ 0.33
CBX3-204ENST00000456948 TMEM147Q9BVK8 224 aa17.13■□□□□ 0.33
CBX3-204ENST00000456948 PMS2P5A8MQ11 134 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 K7EPK0 472 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 ZNF688P0C7X2 276 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 ORM2P19652 201 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 ID1P41134 155 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 CAV2P51636 162 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 S100A10P60903 97 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 RRAS2P62070 204 aaPredicted RBP17.12■□□□□ 0.33
CBX3-204ENST00000456948 TEPPQ6URK8 271 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 CYP2G1PQ6ZSU1 146 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 OVOL2Q9BRP0 275 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 RNF24Q9Y225 148 aa17.12■□□□□ 0.33
CBX3-204ENST00000456948 DEDDO75618 318 aa17.11■□□□□ 0.33
CBX3-204ENST00000456948 RAP2BP61225 183 aa17.11■□□□□ 0.33
CBX3-204ENST00000456948 IFITM3Q01628 133 aa17.11■□□□□ 0.33
CBX3-204ENST00000456948 ZNF124Q15973 351 aa17.11■□□□□ 0.33
CBX3-204ENST00000456948 RLN2P04090 185 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 GALR1P47211 349 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 CYCSP99999 105 aaKnown RBP17.1■□□□□ 0.33
CBX3-204ENST00000456948 RAB31Q13636 194 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 DEFB135Q30KP9 77 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 FAM24BQ8N5W8 94 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 OR1B1Q8NGR6 318 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 GPR82Q96P67 336 aa17.1■□□□□ 0.33
CBX3-204ENST00000456948 TMEM41BQ5BJD5 291 aa17.09■□□□□ 0.33
CBX3-204ENST00000456948 PSMG4Q5JS54 123 aa17.09■□□□□ 0.33
CBX3-204ENST00000456948 GATAD1Q8WUU5 269 aa17.09■□□□□ 0.33
CBX3-204ENST00000456948 RNF183Q96D59 192 aa17.09■□□□□ 0.33
CBX3-204ENST00000456948 MARVELD1Q9BSK0 173 aa17.09■□□□□ 0.33
CBX3-204ENST00000456948 GOSR2O14653 212 aa17.08■□□□□ 0.32
CBX3-204ENST00000456948 HYPMO75409 117 aa17.08■□□□□ 0.32
CBX3-204ENST00000456948 MEOX2P50222 304 aa17.08■□□□□ 0.32
CBX3-204ENST00000456948 MORN3Q6PF18 240 aaPredicted RBP17.08■□□□□ 0.32
CBX3-204ENST00000456948 STX12Q86Y82 276 aa17.08■□□□□ 0.32
CBX3-204ENST00000456948 KMT2CQ8NEZ4 4911 aaKnown RBP17.07■□□□□ 0.32
CBX3-204ENST00000456948 CCNKO75909 580 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 GATA2P23769 480 aaPredicted RBP17.07■□□□□ 0.32
CBX3-204ENST00000456948 HBG1P69891 147 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 HBG2P69892 147 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 PXDC1Q5TGL8 231 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 ZNF546Q86UE3 836 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 TMEM217Q8N7C4 229 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 SLC25A22Q9H936 323 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 HIGD1AQ9Y241 93 aa17.07■□□□□ 0.32
CBX3-204ENST00000456948 ZNF98A6NK75 572 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 CA1P00915 261 aaPredicted RBP17.06■□□□□ 0.32
CBX3-204ENST00000456948 LINC00869P0C866 280 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 SPP1P10451 314 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 S100A11P31949 105 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 NUTF2P61970 127 aaKnown RBP17.06■□□□□ 0.32
CBX3-204ENST00000456948 SLC38A11Q08AI6 406 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 RAB32Q13637 225 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 ACTL10Q5JWF8 245 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 CASC10Q5T4H9 136 aa17.06■□□□□ 0.32
CBX3-204ENST00000456948 SSNA1O43805 119 aa17.05■□□□□ 0.32
CBX3-204ENST00000456948 OR5G3P0C626 314 aa17.05■□□□□ 0.32
CBX3-204ENST00000456948 PSMB3P49720 205 aa17.05■□□□□ 0.32
CBX3-204ENST00000456948 NMES1Q9C002 83 aa17.05■□□□□ 0.32
CBX3-204ENST00000456948 LYRM2Q9NU23 88 aaPredicted RBP17.05■□□□□ 0.32
CBX3-204ENST00000456948 FAM24AA6NFZ4 105 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 CST7O76096 145 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 SULT1A1P50225 295 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 PLP1P60201 277 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 IL15RAQ13261 267 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 TMEM182Q6ZP80 229 aaPredicted RBP17.04■□□□□ 0.32
CBX3-204ENST00000456948 LINC00052Q96N35 136 aa17.04■□□□□ 0.32
CBX3-204ENST00000456948 KNCNA6PVL3 124 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 ISLRO14498 428 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 ATP6V1FQ16864 119 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 TRPT1Q86TN4 253 aaKnown RBP17.03■□□□□ 0.32
CBX3-204ENST00000456948 RARRES2Q99969 163 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 SLC25A31Q9H0C2 315 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 ARL6Q9H0F7 186 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 UQCC1Q9NVA1 299 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 DOK5Q9P104 306 aa17.03■□□□□ 0.32
CBX3-204ENST00000456948 RPL7P18124 248 aaKnown RBP17.02■□□□□ 0.32
CBX3-204ENST00000456948 ARL16Q0P5N6 197 aa17.02■□□□□ 0.32
CBX3-204ENST00000456948 TMEM252Q8N6L7 170 aa17.02■□□□□ 0.32
CBX3-204ENST00000456948 C16orf92Q96LL3 132 aa17.02■□□□□ 0.32
CBX3-204ENST00000456948 RSG1Q9BU20 258 aa17.02■□□□□ 0.32
CBX3-204ENST00000456948 SLC25A39Q9BZJ4 359 aaPredicted RBP17.02■□□□□ 0.32
CBX3-204ENST00000456948 E5RGE8 158 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 AGPAT2O15120 278 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 ATF4P18848 351 aaPredicted RBP17.01■□□□□ 0.31
CBX3-204ENST00000456948 SPATA31B1PQ5VZV4 182 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 ZFAND6Q6FIF0 208 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 Q6ZRG5 221 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 SHANK2-AS3Q9BTD1 123 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 C1QTNF4Q9BXJ3 329 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 SLC25A32Q9H2D1 315 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 C11orf1Q9H5F2 150 aa17.01■□□□□ 0.31
CBX3-204ENST00000456948 DNAH7Q8WXX0 4024 aa17■□□□□ 0.31
CBX3-204ENST00000456948 SIX6O95475 246 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms