RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 GCSAMLQ5JQS6 135 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 TCF24Q7RTU0 167 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 RSG1Q9BU20 258 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 SCRT1Q9BWW7 348 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 NPCDR1Q9BY65 106 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 WDR61Q9GZS3 305 aaKnown RBP10.55□□□□□ -0.72
TIMP1-205ENST00000456754 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
TIMP1-205ENST00000456754 BUB3O43684 328 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 FABP1P07148 127 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 CD7P09564 240 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PRR20EP86478 221 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PRR20CP86479 221 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PRR20DP86480 221 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PRR20BP86481 221 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PRR20AP86496 221 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 MORN5Q5VZ52 161 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 LCN12Q6JVE5 192 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 GLMPQ8WWB7 406 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 PXMP4Q9Y6I8 212 aa10.54□□□□□ -0.72
TIMP1-205ENST00000456754 OR5G3P0C626 314 aa10.53□□□□□ -0.72
TIMP1-205ENST00000456754 RBPMS2Q6ZRY4 209 aaKnown RBP10.53□□□□□ -0.72
TIMP1-205ENST00000456754 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
TIMP1-205ENST00000456754 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
TIMP1-205ENST00000456754 TMEM37Q8WXS4 190 aa10.53□□□□□ -0.72
TIMP1-205ENST00000456754 SLC39A9Q9NUM3 307 aa10.53□□□□□ -0.72
TIMP1-205ENST00000456754 H3BRN7 92 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 HYPMO75409 117 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.732e-6■■■■■ 29.6
TIMP1-205ENST00000456754 CXCL2P19875 107 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 PLP1P60201 277 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 B2MP61769 119 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 SELENOTP62341 195 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 Q8N1Y9 231 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 INO80EQ8NBZ0 244 aaPredicted RBP10.52□□□□□ -0.73
TIMP1-205ENST00000456754 OR2K2Q8NGT1 345 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 SLC25A39Q9BZJ4 359 aaPredicted RBP10.52□□□□□ -0.73
TIMP1-205ENST00000456754 ARV1Q9H2C2 271 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 SLC25A32Q9H2D1 315 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
TIMP1-205ENST00000456754 PRKDCP78527 4128 aaKnown RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 TRAV5A0A0B4J249 113 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 ZNF98A6NK75 572 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 TSPAN4O14817 238 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 SNRPCP09234 159 aaKnown RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 NUP62P37198 522 aaPredicted RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 RPL29P47914 159 aaKnown RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 ZNF124Q15973 351 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
TIMP1-205ENST00000456754 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 TCTE3Q8IZS6 198 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 NEURL2Q9BR09 285 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 MS4A6AQ9H2W1 248 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
TIMP1-205ENST00000456754 A0A1W2PS18 150 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 CFDP00746 253 aaPredicted RBP10.5□□□□□ -0.73
TIMP1-205ENST00000456754 CD81P60033 236 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 RAB31Q13636 194 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 SIGLEC15Q6ZMC9 328 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 HSD17B11Q8NBQ5 300 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 STXBP6Q8NFX7 210 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 NARS2Q96I59 477 aaKnown RBP10.5□□□□□ -0.73
TIMP1-205ENST00000456754 SHANK2-AS3Q9BTD1 123 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 SH3BGRL3Q9H299 93 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 CYTL1Q9NRR1 136 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
TIMP1-205ENST00000456754 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 COX7A2P2O60397 106 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 MPDU1O75352 247 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 IFNA5P01569 189 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 PRB4P10163 310 aaPredicted RBP10.49□□□□□ -0.73
TIMP1-205ENST00000456754 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 SCGB1C1Q8TD33 95 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 GRAMD2BQ96HH9 432 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 SPAG8Q99932 426 aaPredicted RBP10.49□□□□□ -0.73
TIMP1-205ENST00000456754 TMEM231Q9H6L2 316 aa10.49□□□□□ -0.73
TIMP1-205ENST00000456754 FFAR4Q5NUL3 377 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 C10orf113Q5VZT2 155 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 OR8I2Q8N0Y5 310 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 DEFB125Q8N687 156 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 CITED4Q96RK1 184 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 PARD6GQ9BYG4 376 aaPredicted RBP10.48□□□□□ -0.73
TIMP1-205ENST00000456754 DNAJC4Q9NNZ3 241 aa10.48□□□□□ -0.73
TIMP1-205ENST00000456754 AGRNO00468 2067 aa10.47□□□□□ -0.73
TIMP1-205ENST00000456754 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
TIMP1-205ENST00000456754 H3BTX0 84 aa10.47□□□□□ -0.73
TIMP1-205ENST00000456754 K7EQG2 157 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms