RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 HBE1P02100 147 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 CCR6P51684 374 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 PAX9P55771 341 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 OR2F1Q13607 317 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 OXA1LQ15070 435 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 EBLN2Q6P2I7 272 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-202ENST00000456096 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 C7orf50Q9BRJ6 194 aaKnown RBP11.87□□□□□ -0.51
TVP23A-202ENST00000456096 SHPKQ9UHJ6 478 aa11.87□□□□□ -0.51
TVP23A-202ENST00000456096 YTHDF2Q9Y5A9 579 aaKnown RBP11.87□□□□□ -0.51
TVP23A-202ENST00000456096 A0A0J9YX75 114 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 SNRPGP15A8MWD9 76 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 ISLRO14498 428 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
TVP23A-202ENST00000456096 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 ZNF575Q86XF7 245 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 PPP1R14BQ96C90 147 aa11.86□□□□□ -0.51
TVP23A-202ENST00000456096 LRP1BQ9NZR2 4599 aa11.85□□□□□ -0.51
TVP23A-202ENST00000456096 FABP1P07148 127 aa11.85□□□□□ -0.51
TVP23A-202ENST00000456096 AKR1C4P17516 323 aa11.85□□□□□ -0.51
TVP23A-202ENST00000456096 C20orf173Q96LM9 149 aa11.85□□□□□ -0.51
TVP23A-202ENST00000456096 KRTAP4-5Q9BYR2 181 aa11.85□□□□□ -0.51
TVP23A-202ENST00000456096 CTDSPLO15194 276 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 SMIM18P0DKX4 95 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 IL18Q14116 193 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 OR1S1Q8NH92 325 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 TRGV9Q99603 122 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 MAGT1Q9H0U3 335 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
TVP23A-202ENST00000456096 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 ANKRD20A5PA0PJZ0 165 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 DAD1P61803 113 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 SPCS2Q15005 226 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 SCP2D1Q9UJQ7 156 aa11.83□□□□□ -0.52
TVP23A-202ENST00000456096 PRM2P04554 102 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 IGF2BP2-AS1Q96M15 143 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 C17orf77Q96MU5 243 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 TMEM208Q9BTX3 173 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 RSG1Q9BU20 258 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 SLC25A32Q9H2D1 315 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 MCUBQ9NWR8 336 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 DOK5Q9P104 306 aa11.82□□□□□ -0.52
TVP23A-202ENST00000456096 A8MTW9 85 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 IAPPP10997 89 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 ANXA3P12429 323 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 GALR1P47211 349 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 MEOX2P50222 304 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 RAB11AP62491 216 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 SRPXP78539 464 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 SLC25A22Q9H936 323 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
TVP23A-202ENST00000456096 TMED3Q9Y3Q3 217 aa11.81□□□□□ -0.52
TVP23A-202ENST00000456096 ZNF98A6NK75 572 aa11.8□□□□□ -0.52
TVP23A-202ENST00000456096 ZNF705GA8MUZ8 300 aaPredicted RBP11.8□□□□□ -0.52
TVP23A-202ENST00000456096 PITX3O75364 302 aa11.8□□□□□ -0.52
TVP23A-202ENST00000456096 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
TVP23A-202ENST00000456096 RABL2BQ9UNT1 228 aa11.8□□□□□ -0.52
TVP23A-202ENST00000456096 CFDP00746 253 aaPredicted RBP11.79□□□□□ -0.52
TVP23A-202ENST00000456096 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
TVP23A-202ENST00000456096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.79□□□□□ -0.52
TVP23A-202ENST00000456096 C15orf53Q8NAA6 179 aa11.79□□□□□ -0.52
TVP23A-202ENST00000456096 M0R2Z0 102 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 ORM2P19652 201 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 GATA2P23769 480 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 IGFL4Q6B9Z1 124 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 TMEM182Q6ZP80 229 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 OR11H7Q8NGC8 314 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 SLC45A2Q9UMX9 530 aa11.78□□□□□ -0.52
TVP23A-202ENST00000456096 APOBP04114 4563 aaKnown RBP11.78□□□□□ -0.52
TVP23A-202ENST00000456096 LYRM9A8MSI8 78 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 TNP2Q05952 138 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 OR4D5Q8NGN0 318 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.53
TVP23A-202ENST00000456096 RSL24D1Q9UHA3 163 aaKnown RBP11.77□□□□□ -0.53
TVP23A-202ENST00000456096 TRAV8-2A0A0B4J237 113 aa11.76□□□□□ -0.53
TVP23A-202ENST00000456096 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
TVP23A-202ENST00000456096 PRSS46E5RG02 174 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms