RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 WFDC5Q8TCV5 224 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 RSPO3Q9BXY4 272 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-204ENST00000455883 SIGLEC8Q9NYZ4 499 aa4.36□□□□□ -1.71
CSMD3-204ENST00000455883 A0A1W2PPV9 198 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IGHV2-70P01814 119 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM52Q8NDY8 209 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 K7EP34 96 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 TBX6O95947 436 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-204ENST00000455883 CD300CQ08708 224 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 ECSCRQ19T08 205 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 NMSQ5H8A3 153 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IGHV1-69DA0A0B4J2H0 117 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 RBAKDNA6NC62 111 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 RAMP3O60896 148 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 LILRA1O75019 489 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 GZMBP10144 247 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 PSG4Q00888 419 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 TRAV5A0A0B4J249 113 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 M0R1W7 72 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 APOBEC3AP31941 199 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-204ENST00000455883 NPC2P61916 151 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 SPATA46Q5T0L3 261 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 PLAC1Q9HBJ0 212 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IGHV5-51A0A0C4DH38 117 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 NDUFB1O75438 58 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IGFBP2P18065 325 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 IGHV3-9P01782 118 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 PDCD1Q15116 288 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 LDLRAD4O15165 306 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 GFRA3O60609 400 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 COX8AP10176 69 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 HLA-DRB4P13762 266 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 MRPL23Q16540 153 aaKnown RBP4.35□□□□□ -1.71
CSMD3-204ENST00000455883 LGALS9BQ3B8N2 356 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 C1QL3Q5VWW1 255 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 MUC7Q8TAX7 377 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 HLA-DRB4X5D2U9 266 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 C9JQL5 133 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 F8VRH5 84 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 C9orf153Q5TBE3 101 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 STPG4Q8N801 248 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 KLF14Q8TD94 323 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-204ENST00000455883 SAA2-SAA4A0A096LPE2 208 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 NCR2O95944 276 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 RMI2Q96E14 147 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 CST9LQ9H4G1 147 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 BAHCC1Q9P281 2608 aa4.35□□□□□ -1.71
CSMD3-204ENST00000455883 H3BMG7 143 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF137PP52743 207 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 HERV-K104P63124 156 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KLF2Q9Y5W3 355 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 LILRA3Q8N6C8 439 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 RTBDNQ9BSG5 229 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KLRD1Q13241 179 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 PRDM6Q9NQX0 595 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 PPIAL4CA0A0B4J2A2 164 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 JMJD7-PLA2G4BH0Y9G9 81 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 PPIAL4GP0DN37 164 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KIR2DL5AQ8N109 375 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 DEFB108BQ8NET1 73 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 MRPL53Q96EL3 112 aaKnown RBP4.34□□□□□ -1.71
CSMD3-204ENST00000455883 MESP1Q9BRJ9 268 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 CENPVL1A0A0U1RR11 272 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 PSG3Q16557 428 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 H7C2G1 150 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 DEFB103AP81534 67 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 KIR3DS1Q14943 382 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 C20orf204Q6ZNR8 217 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 IGKV1D-42A0A075B6H8 117 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF138P52744 262 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM240Q5SV17 173 aa4.34□□□□□ -1.71
CSMD3-204ENST00000455883 H3BUA1 57 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 IGHV1-45A0A0A0MS14 117 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 INSP01308 110 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 GATA4P43694 442 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 PRSS12P56730 875 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 YPEL3P61236 119 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-204ENST00000455883 VKORC1Q9BQB6 163 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 PRO1854Q9UHT4 67 aa4.34□□□□□ -1.72
CSMD3-204ENST00000455883 SUPT4H1P63272 117 aaKnown RBP4.34□□□□□ -1.72
CSMD3-204ENST00000455883 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.72
CSMD3-204ENST00000455883 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.72
CSMD3-204ENST00000455883 DEFB108AA8MXU0 73 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 Q6ZS92 163 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 C12orf76Q8N812 135 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-204ENST00000455883 RLN3Q8WXF3 142 aa4.33□□□□□ -1.72
CSMD3-204ENST00000455883 ZNF501Q96CX3 271 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms