RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TMED3Q9Y3Q3 217 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 FAT2Q9NYQ8 4349 aa13.28□□□□□ -0.28
UBE2D4-208ENST00000454350 PSMB3P49720 205 aa13.27□□□□□ -0.29
UBE2D4-208ENST00000454350 TMEM182Q6ZP80 229 aaPredicted RBP13.27□□□□□ -0.29
UBE2D4-208ENST00000454350 NEU1Q99519 415 aa13.27□□□□□ -0.29
UBE2D4-208ENST00000454350 DNAH2Q9P225 4427 aa13.27□□□□□ -0.29
UBE2D4-208ENST00000454350 SYNGR2O43760 224 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 FXYD7P58549 80 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 RAB11AP62491 216 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 GGNBP1Q5YKI7 109 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 FOXI2Q6ZQN5 318 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 LINC00052Q96N35 136 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 PFDN2Q9UHV9 154 aa13.26□□□□□ -0.29
UBE2D4-208ENST00000454350 F6UB75 175 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 WRBO00258 174 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 MED6O75586 246 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 IGKV3-20P01619 116 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 FABP1P07148 127 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 HOXB5P09067 269 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 PAX9P55771 341 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 CENPSQ8N2Z9 138 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 CIB3Q96Q77 187 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 SRRQ9GZT4 340 aa13.25□□□□□ -0.29
UBE2D4-208ENST00000454350 HERC2O95714 4834 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 DNAH17Q9UFH2 4485 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 DEFB131BA0A096LNP1 70 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 A8MTW9 85 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 ISLRO14498 428 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 AMBPP02760 352 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 GATA2P23769 480 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 ID1P41134 155 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 OR8I2Q8N0Y5 310 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 SLC35B3Q9H1N7 401 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
UBE2D4-208ENST00000454350 S100A5P33763 92 aa13.23□□□□□ -0.29
UBE2D4-208ENST00000454350 ID3Q02535 119 aa13.23□□□□□ -0.29
UBE2D4-208ENST00000454350 PAIP2BQ9ULR5 123 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-208ENST00000454350 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
UBE2D4-208ENST00000454350 A0A0J9YX75 114 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 C9orf170A2RU37 121 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 ZNF98A6NK75 572 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 H3BP45 60 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 ADAP1O75689 374 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 CFDP00746 253 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 UBE2MP61081 183 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 BAK1Q16611 211 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 SPANXN5Q5MJ07 72 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 FAM78BQ5VT40 261 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 C1orf158Q8N1D5 194 aa13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 SDHCQ99643 169 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-208ENST00000454350 NACAE9PAV3 2078 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 NDUFB6O95139 128 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 ACOT7LQ6ZUV0 252 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 FLVCR2Q9UPI3 526 aa13.21□□□□□ -0.29
UBE2D4-208ENST00000454350 BTCP35070 178 aa13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 PSG9Q00887 426 aa13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 OR4D5Q8NGN0 318 aa13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 RSG1Q9BU20 258 aa13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
UBE2D4-208ENST00000454350 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 CCDC160A6NGH7 325 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 MEOX2P50222 304 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 TMEM144Q7Z5S9 345 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 STRAPQ9Y3F4 350 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
UBE2D4-208ENST00000454350 PKHD1P08F94 4074 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 KIAA1109Q2LD37 5005 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 CCNKO75909 580 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 SPART-AS1P0CW21 52 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 ORM2P19652 201 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 GALR1P47211 349 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 EMP1P54849 157 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 SPANXN2Q5MJ10 180 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 SAMD13Q5VXD3 122 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 EBLN2Q6P2I7 272 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 KRTAP17-1Q9BYP8 105 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
UBE2D4-208ENST00000454350 H3BRN7 92 aa13.17□□□□□ -0.3
UBE2D4-208ENST00000454350 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
UBE2D4-208ENST00000454350 FAM222AQ5U5X8 452 aa13.17□□□□□ -0.3
UBE2D4-208ENST00000454350 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms