RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LSM4Q9Y4Z0 139 aaKnown RBP6.6□□□□□ -1.35
COL28A1-205ENST00000453441 HSPB11Q9Y547 144 aa6.6□□□□□ -1.35
COL28A1-205ENST00000453441 IGKV1OR2-108A0A075B7D4 117 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 WI2-2373I1.2A0A1W2PRP0 233 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 CCNKO75909 580 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 IL4P05112 153 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 HNRNPCP07910 306 aaKnown RBP eCLIP6.59□□□□□ -1.35
COL28A1-205ENST00000453441 AP2S1P53680 142 aaPredicted RBP6.59□□□□□ -1.35
COL28A1-205ENST00000453441 PLP1P60201 277 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 ARL16Q0P5N6 197 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 RBPMS2Q6ZRY4 209 aaKnown RBP6.59□□□□□ -1.35
COL28A1-205ENST00000453441 CYP2G1PQ6ZSU1 146 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 INO80EQ8NBZ0 244 aaPredicted RBP6.59□□□□□ -1.35
COL28A1-205ENST00000453441 OR5C1Q8NGR4 320 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 ZNF414Q96IQ9 312 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
COL28A1-205ENST00000453441 VSIRQ9H7M9 311 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 FBXL17Q9UF56 701 aa6.59□□□□□ -1.35
COL28A1-205ENST00000453441 TRAV2A0A0B4J234 112 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 HELTA6NFD8 242 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 C17orf112F2Z3M2 114 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 CHEK1O14757 476 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 TSPAN4O14817 238 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 AGPAT2O15120 278 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 IFNA5P01569 189 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 CAMLGP49069 296 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF90Q03938 601 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF266Q14584 549 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 CD300EQ496F6 205 aaPredicted RBP6.58□□□□□ -1.36
COL28A1-205ENST00000453441 C1orf194Q5T5A4 169 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 SAMD13Q5VXD3 122 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 ADAMTSL5Q6ZMM2 481 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 GPR82Q96P67 336 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 ATP5SQ99766 215 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 RHPN1-AS1Q9BWJ2 59 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
COL28A1-205ENST00000453441 FBN3Q75N90 2809 aa6.58□□□□□ -1.36
COL28A1-205ENST00000453441 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 OR4C46A6NHA9 309 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 HYPMO75409 117 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 LINC00869P0C866 280 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 GP9P14770 177 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 RPL29P47914 159 aaKnown RBP6.57□□□□□ -1.36
COL28A1-205ENST00000453441 LYZP61626 148 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 PAFAH1B2P68402 229 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 NHLH2Q02577 135 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 OR2F1Q13607 317 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 OPCMLQ14982 345 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 USF2Q15853 346 aaPredicted RBP6.57□□□□□ -1.36
COL28A1-205ENST00000453441 Q6ZRG5 221 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 GTSCR1Q86UQ5 136 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 PFDN5Q99471 154 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 PBDC1Q9BVG4 233 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 MLXQ9UH92 298 aa6.57□□□□□ -1.36
COL28A1-205ENST00000453441 FXYD6-FXYD2A0A087WZ82 144 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 HMSDA8MTL9 139 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 TAAR5O14804 337 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF207O43670 478 aaKnown RBP6.56□□□□□ -1.36
COL28A1-205ENST00000453441 BUB3O43684 328 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 FGF7P21781 194 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 CLINT1Q14677 625 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 C16orf54Q6UWD8 224 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 TCTE3Q8IZS6 198 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 OR1L4Q8NGR5 311 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 SCGB1C1Q8TD33 95 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 PPP1R14BQ96C90 147 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 MGST2Q99735 147 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 FAM110AQ9BQ89 295 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 NEURL2Q9BR09 285 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 GGTLC1Q9BX51 225 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 NPCDR1Q9BY65 106 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
COL28A1-205ENST00000453441 SEPSECSQ9HD40 501 aaKnown RBP6.56□□□□□ -1.36
COL28A1-205ENST00000453441 TNFSF18Q9UNG2 199 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 HIGD1AQ9Y241 93 aa6.56□□□□□ -1.36
COL28A1-205ENST00000453441 IGHV3OR16-8A0A075B7F1 116 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 COX7A2P2O60397 106 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 MEOX2P50222 304 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 KRTAP10-11P60412 298 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 B2MP61769 119 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 ZNF345Q14585 488 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 GUCA2BQ16661 112 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 TCF24Q7RTU0 167 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 OR1B1Q8NGR6 318 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 GATAD1Q8WUU5 269 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 GLMPQ8WWB7 406 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 ST8SIA2Q92186 375 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 RNF2Q99496 336 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 SLC39A9Q9NUM3 307 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 TIMM9Q9Y5J7 89 aa6.55□□□□□ -1.36
COL28A1-205ENST00000453441 A0A0D9SG52 128 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms