RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PEMTQ9UBM1 199 aa11.79□□□□□ -0.52
VCX3B-204ENST00000453306 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 EIF2B2P49770 351 aaKnown RBP11.78□□□□□ -0.52
VCX3B-204ENST00000453306 PLP1P60201 277 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 LYZP61626 148 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 GCSAMLQ5JQS6 135 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 LAMTOR1Q6IAA8 161 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 TMEM37Q8WXS4 190 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 PBDC1Q9BVG4 233 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 ELOVL1Q9BW60 279 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 DOK5Q9P104 306 aa11.78□□□□□ -0.52
VCX3B-204ENST00000453306 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
VCX3B-204ENST00000453306 ORM2P19652 201 aa11.77□□□□□ -0.53
VCX3B-204ENST00000453306 NPPCP23582 126 aa11.77□□□□□ -0.53
VCX3B-204ENST00000453306 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
VCX3B-204ENST00000453306 RPL29P47914 159 aaKnown RBP11.77□□□□□ -0.53
VCX3B-204ENST00000453306 CD300EQ496F6 205 aaPredicted RBP11.77□□□□□ -0.53
VCX3B-204ENST00000453306 MORN5Q5VZ52 161 aa11.77□□□□□ -0.53
VCX3B-204ENST00000453306 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.53
VCX3B-204ENST00000453306 RNF2Q99496 336 aa11.77□□□□□ -0.53
VCX3B-204ENST00000453306 ZNF785A8K8V0 405 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 DFFBO76075 338 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 SELENOTP62341 195 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 MARC2Q969Z3 335 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
VCX3B-204ENST00000453306 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
VCX3B-204ENST00000453306 BUB3O43684 328 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 SCGB2A1O75556 95 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 FABP1P07148 127 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 HNRNPCP07910 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
VCX3B-204ENST00000453306 NKX2-5P52952 324 aaPredicted RBP11.75□□□□□ -0.53
VCX3B-204ENST00000453306 ZNF345Q14585 488 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 C16orf54Q6UWD8 224 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 TMEM61Q8N0U2 210 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 GLMPQ8WWB7 406 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 METTL26Q96S19 204 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 ASCL2Q99929 193 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 SH3BGRL3Q9H299 93 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 ARV1Q9H2C2 271 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 SMAD5-AS1Q9Y6J3 95 aa11.75□□□□□ -0.53
VCX3B-204ENST00000453306 MPDU1O75352 247 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 HYPMO75409 117 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 IFNA5P01569 189 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 C9orf62Q8N4C0 152 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
VCX3B-204ENST00000453306 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
VCX3B-204ENST00000453306 ATP6V0CP27449 155 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 B2MP61769 119 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 RAB31Q13636 194 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 SPATA31B1PQ5VZV4 182 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
VCX3B-204ENST00000453306 SLC25A39Q9BZJ4 359 aaPredicted RBP11.73□□□□□ -0.53
VCX3B-204ENST00000453306 TECRQ9NZ01 308 aaKnown RBP11.73□□□□□ -0.53
VCX3B-204ENST00000453306 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 A0A0D9SG52 128 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 H3BRN7 92 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 EIF3GO75821 320 aaKnown RBP eCLIP11.72□□□□□ -0.53
VCX3B-204ENST00000453306 OR5G3P0C626 314 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 TCF24Q7RTU0 167 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 DYNLRB2Q8TF09 96 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 ARPC5LQ9BPX5 153 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
VCX3B-204ENST00000453306 BCL2L11O43521 198 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 ZNF266Q14584 549 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 ZFP69Q49AA0 526 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
VCX3B-204ENST00000453306 TAAR5O14804 337 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
VCX3B-204ENST00000453306 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 PXDC1Q5TGL8 231 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 SLC25A32Q9H2D1 315 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 ZMAT4Q9H898 229 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
VCX3B-204ENST00000453306 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
VCX3B-204ENST00000453306 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 TSPAN4O14817 238 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 COX7A2P2O60397 106 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 RAB2AP61019 212 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 Q6ZRG5 221 aa11.69□□□□□ -0.54
VCX3B-204ENST00000453306 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms