RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 IL36BQ9NZH7 164 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 IGLV2-8P01709 118 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 HIST1H1BP16401 226 aaKnown RBP9.28□□□□□ -0.92
VTA1-203ENST00000452973 BRS3P32247 399 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 UBE2G1P62253 170 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 RPEL1Q2QD12 228 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 IBA57Q5T440 356 aaKnown RBP9.28□□□□□ -0.92
VTA1-203ENST00000452973 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 V9GYV3 84 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 CENPVL3A0A0U1RRI6 287 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 OR2T8A6NH00 312 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 NPFFO15130 113 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 NDUFB8O95169 186 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 FCGR2BP31994 310 aaPredicted RBP9.28□□□□□ -0.92
VTA1-203ENST00000452973 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 Q8N6K4 173 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 Q8N9W7 124 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 SRSF8Q9BRL6 282 aaKnown RBP9.28□□□□□ -0.92
VTA1-203ENST00000452973 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
VTA1-203ENST00000452973 A1L4Q6 167 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 ZNF705GA8MUZ8 300 aaPredicted RBP9.27□□□□□ -0.93
VTA1-203ENST00000452973 OOSP1A8MZH6 123 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 GP9P14770 177 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 IER3P46695 156 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 C17orf77Q96MU5 243 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 TCEAL7Q9BRU2 100 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 Q9H3A6 140 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 EPDR1Q9UM22 224 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 TRAV40A0A0B4J280 105 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 A0A1B0GUS0 222 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 LINC01548A6NM66 108 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 RNF125Q96EQ8 232 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 AJUBAQ96IF1 538 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 IGF2BP2-AS1Q96M15 143 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 BBC3Q96PG8 261 aaPredicted RBP9.27□□□□□ -0.93
VTA1-203ENST00000452973 SPOCK3Q9BQ16 436 aa9.27□□□□□ -0.93
VTA1-203ENST00000452973 TBL2Q9Y4P3 447 aaKnown RBP9.27□□□□□ -0.93
VTA1-203ENST00000452973 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 MFAP4P55083 255 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 CLEC2AQ6UVW9 174 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 UNQ5815/PRO19632Q6UWF5 114 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 C1RLQ9NZP8 487 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 LINC00527Q9UJ94 153 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 PITPNC1Q9UKF7 332 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 CDC42EP3Q9UKI2 254 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 LY96Q9Y6Y9 160 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 IGLV11-55A0A075B6I3 123 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 SMIM6P0DI80 62 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 RAB4BP61018 213 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 ZNF491Q8N8L2 437 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 ASCL2Q99929 193 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 ZNF586Q9NXT0 402 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 C21orf62Q9NYP8 219 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
VTA1-203ENST00000452973 G3V318 75 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 TYMSP04818 313 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
VTA1-203ENST00000452973 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 FBXL7Q9UJT9 491 aa9.26□□□□□ -0.93
VTA1-203ENST00000452973 GRIFINA4D1Z8 144 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 ATP6V0E1O15342 81 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 GCGP01275 180 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 FABP1P07148 127 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
VTA1-203ENST00000452973 PLP1P60201 277 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 RPL15P61313 204 aaKnown RBP9.25□□□□□ -0.93
VTA1-203ENST00000452973 EBI3Q14213 229 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 USF2Q15853 346 aaPredicted RBP9.25□□□□□ -0.93
VTA1-203ENST00000452973 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
VTA1-203ENST00000452973 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 THYN1Q9P016 225 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 ABCA12Q86UK0 2595 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 PTPN13Q12923 2485 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 NPIPB5A8MRT5 1133 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 ADMP35318 185 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 TAS2R60P59551 318 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 C9orf152Q5JTZ5 239 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 FAM209BQ5JX69 171 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
VTA1-203ENST00000452973 MRPL27Q9P0M9 148 aaKnown RBP9.25□□□□□ -0.93
VTA1-203ENST00000452973 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 CDPF1Q6NVV7 123 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 MYCNOSP40205 109 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 PRR31Q5SQ13 230 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 C10orf105Q8TEF2 133 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 HIST1H2BLQ99880 126 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 ANKRD17O75179 2603 aaKnown RBP9.24□□□□□ -0.93
VTA1-203ENST00000452973 TOMM40O96008 361 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 LY6EQ16553 131 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms