RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TM4SF20Q53R12 229 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 TMEM61Q8N0U2 210 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 VN1R17PQ8TDU5 208 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 WFDC10AQ9H1F0 79 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 KCNIP2Q9NS61 270 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 MED9Q9NWA0 146 aa16.29■□□□□ 0.2
C9orf3-208ENST00000451893 IGHV3-21A0A0B4J1V1 117 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 LINC00862A6NCI5 91 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 OR2T8A6NH00 312 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 TGOLN2O43493 480 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 FGF7P21781 194 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 Q56UQ5 140 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 TMEM144Q7Z5S9 345 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 RETNQ9HD89 108 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 MLXQ9UH92 298 aa16.28■□□□□ 0.2
C9orf3-208ENST00000451893 MBP02144 154 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 KLK9Q2XQG4 91 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 TEPPQ6URK8 271 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 SLC35E1Q96K37 410 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 FAM110AQ9BQ89 295 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 C20orf24Q9BUV8 137 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 C21orf62Q9NYP8 219 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 MRPL27Q9P0M9 148 aaKnown RBP16.27■□□□□ 0.2
C9orf3-208ENST00000451893 KLK9Q9UKQ9 250 aa16.27■□□□□ 0.2
C9orf3-208ENST00000451893 SMCO3A2RU48 225 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 FAM74A1Q5RGS3 127 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 AKR1C8PQ5T2L2 129 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 UNQ9165/PRO28630Q6UXU0 137 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 SH3BGRL3Q9H299 93 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 EDA2RQ9HAV5 297 aa16.26■□□□□ 0.19
C9orf3-208ENST00000451893 HUWE1Q7Z6Z7 4374 aaKnown RBP16.26■□□□□ 0.19
C9orf3-208ENST00000451893 ZNF705EA8MWA4 302 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-208ENST00000451893 ELLP55199 621 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-208ENST00000451893 SPSB3Q6PJ21 355 aa16.25■□□□□ 0.19
C9orf3-208ENST00000451893 IL17DQ8TAD2 202 aa16.25■□□□□ 0.19
C9orf3-208ENST00000451893 NPCDR1Q9BY65 106 aa16.25■□□□□ 0.19
C9orf3-208ENST00000451893 TRAV25A0A0B4J276 109 aa16.24■□□□□ 0.19
C9orf3-208ENST00000451893 OPRK1P41145 380 aa16.24■□□□□ 0.19
C9orf3-208ENST00000451893 AKR1C1Q04828 323 aa16.24■□□□□ 0.19
C9orf3-208ENST00000451893 GAMTQ14353 236 aa16.24■□□□□ 0.19
C9orf3-208ENST00000451893 MISP3Q96FF7 219 aa16.24■□□□□ 0.19
C9orf3-208ENST00000451893 GAR1Q9NY12 217 aaKnown RBP16.24■□□□□ 0.19
C9orf3-208ENST00000451893 RBMY1BA6NDE4 496 aaKnown RBP16.23■□□□□ 0.19
C9orf3-208ENST00000451893 RBMY1EA6NEQ0 496 aaKnown RBP16.23■□□□□ 0.19
C9orf3-208ENST00000451893 RBMY1DP0C7P1 496 aaKnown RBP16.23■□□□□ 0.19
C9orf3-208ENST00000451893 TMEM182Q6ZP80 229 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-208ENST00000451893 TMEM190Q8WZ59 177 aa16.23■□□□□ 0.19
C9orf3-208ENST00000451893 RSG1Q9BU20 258 aa16.23■□□□□ 0.19
C9orf3-208ENST00000451893 DAZ1Q9NQZ3 744 aaKnown RBP16.23■□□□□ 0.19
C9orf3-208ENST00000451893 PLA2G2EQ9NZK7 142 aa16.23■□□□□ 0.19
C9orf3-208ENST00000451893 PFDN2Q9UHV9 154 aa16.23■□□□□ 0.19
C9orf3-208ENST00000451893 NUPL2O15504 423 aaKnown RBP16.22■□□□□ 0.19
C9orf3-208ENST00000451893 RPL29P47914 159 aaKnown RBP16.22■□□□□ 0.19
C9orf3-208ENST00000451893 CAMLGP49069 296 aa16.22■□□□□ 0.19
C9orf3-208ENST00000451893 GGTLC1Q9BX51 225 aa16.22■□□□□ 0.19
C9orf3-208ENST00000451893 LOC102724200A0A096LPH7 203 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-208ENST00000451893 NDUFA4O00483 81 aa16.21■□□□□ 0.19
C9orf3-208ENST00000451893 YIF1AO95070 293 aa16.21■□□□□ 0.19
C9orf3-208ENST00000451893 MFAP2P55001 183 aa16.21■□□□□ 0.19
C9orf3-208ENST00000451893 RELQ04864 619 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-208ENST00000451893 TMEM116Q8NCL8 245 aa16.21■□□□□ 0.19
C9orf3-208ENST00000451893 SELENOTP62341 195 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 ACOT6Q3I5F7 207 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-208ENST00000451893 TMEM41BQ5BJD5 291 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 LINC00322Q6ZN03 302 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-208ENST00000451893 THAP8Q8NA92 274 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 LYPD6BQ8NI32 183 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 ATP6V0BQ99437 205 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 MGST2Q99735 147 aa16.2■□□□□ 0.18
C9orf3-208ENST00000451893 SPAG8Q99932 426 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-208ENST00000451893 FNDC4Q9H6D8 234 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-208ENST00000451893 IGHV3OR16-8A0A075B7F1 116 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 TEX46H3BTG2 121 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 AGPAT2O15120 278 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 ZNF207O43670 478 aaKnown RBP16.19■□□□□ 0.18
C9orf3-208ENST00000451893 C8orf88P0DMB2 117 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 MFAP4P55083 255 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 RAB2AP61019 212 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 PXDC1Q5TGL8 231 aa16.19■□□□□ 0.18
C9orf3-208ENST00000451893 I3L2K1 104 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 GNG7O60262 68 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 MT-CO2P00403 227 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 M6PRP20645 277 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 FFAR4Q5NUL3 377 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 Q6ZRG5 221 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 OR4X1Q8NH49 305 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 FAM213BQ8TBF2 198 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 CHRDL1Q9BU40 450 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 SLC45A2Q9UMX9 530 aa16.18■□□□□ 0.18
C9orf3-208ENST00000451893 TRAV1-1A0A0B4J248 108 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 OR4C46A6NHA9 309 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 K7EIM0 57 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 HBE1P02100 147 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 MLANAQ16655 118 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 PCNPQ8WW12 178 aaKnown RBP16.17■□□□□ 0.18
C9orf3-208ENST00000451893 NPIPB3Q92617 1050 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 ACY3Q96HD9 319 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 TRGV9Q99603 122 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 RPRMQ9NS64 109 aa16.17■□□□□ 0.18
C9orf3-208ENST00000451893 PXMP4Q9Y6I8 212 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms