RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 PBDC1Q9BVG4 233 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 SRD5A3Q9H8P0 318 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 FBXL17Q9UF56 701 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 WDR83OSQ9Y284 106 aa10.68□□□□□ -0.7
COL3A1-203ENST00000450867 GATA2P23769 480 aaPredicted RBP10.67□□□□□ -0.7
COL3A1-203ENST00000450867 BAXQ07812 192 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 LRRC37A5PQ49AS3 106 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 PXDC1Q5TGL8 231 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 ZNF546Q86UE3 836 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 OR11H7Q8NGC8 314 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 CITED4Q96RK1 184 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 TMEM147Q9BVK8 224 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 SLC25A31Q9H0C2 315 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 MED28Q9H204 178 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 TUBA4BQ9H853 241 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 SEPSECSQ9HD40 501 aaKnown RBP10.67□□□□□ -0.7
COL3A1-203ENST00000450867 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
COL3A1-203ENST00000450867 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 AGRNO00468 2067 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
COL3A1-203ENST00000450867 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
COL3A1-203ENST00000450867 AGPAT2O15120 278 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
COL3A1-203ENST00000450867 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL3A1-203ENST00000450867 FCN2Q15485 313 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 HAGHQ16775 308 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 SIGLEC15Q6ZMC9 328 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 TMEM217Q8N7C4 229 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 MGST2Q99735 147 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 MAP6D1Q9H9H5 199 aa10.66□□□□□ -0.7
COL3A1-203ENST00000450867 DNASE2O00115 360 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-203ENST00000450867 LINC00869P0C866 280 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 S100A7P31151 101 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 NHLH2Q02577 135 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 GBGT1Q8N5D6 347 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 NRN1Q9NPD7 142 aa10.65□□□□□ -0.7
COL3A1-203ENST00000450867 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 ZNF98A6NK75 572 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 H3BRN7 92 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 MPDU1O75352 247 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 GIPP09681 153 aaPredicted RBP10.64□□□□□ -0.71
COL3A1-203ENST00000450867 TFPI2P48307 235 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 CAMLGP49069 296 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
COL3A1-203ENST00000450867 PRR20EP86478 221 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 PRR20CP86479 221 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 PRR20DP86480 221 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 PRR20BP86481 221 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 PRR20AP86496 221 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 RAB31Q13636 194 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 FAM24BQ8N5W8 94 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 GPR82Q96P67 336 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 ASCL2Q99929 193 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 GGTLC1Q9BX51 225 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 MBD2Q9UBB5 411 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
COL3A1-203ENST00000450867 HYPMO75409 117 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 ORM2P19652 201 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
COL3A1-203ENST00000450867 OPCMLQ14982 345 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 PATE2Q6UY27 113 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 OR1B1Q8NGR6 318 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 SLC25A39Q9BZJ4 359 aaPredicted RBP10.63□□□□□ -0.71
COL3A1-203ENST00000450867 HIGD1AQ9Y241 93 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 HSPB11Q9Y547 144 aa10.63□□□□□ -0.71
COL3A1-203ENST00000450867 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
COL3A1-203ENST00000450867 KIR2DL5BA0A0G2JN68 375 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 KIR2DL5BA0A0G2JPC4 375 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 UBE2L5PA0A1B0GUS4 154 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 SOCS3O14543 225 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
COL3A1-203ENST00000450867 RAP2BP61225 183 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 OR8I2Q8N0Y5 310 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 KIR2DL5AQ8N109 375 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 KIR2DL5BQ8NHK3 375 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 PPP1R14BQ96C90 147 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 ARL6Q9H0F7 186 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 SLC25A32Q9H2D1 315 aa10.62□□□□□ -0.71
COL3A1-203ENST00000450867 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
COL3A1-203ENST00000450867 MEOX2P50222 304 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 FGL1Q08830 312 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 SAMD13Q5VXD3 122 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 WFDC3Q8IUB2 231 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 SCRT1Q9BWW7 348 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 ARV1Q9H2C2 271 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 RNF24Q9Y225 148 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 U3KQK5 164 aa10.61□□□□□ -0.71
COL3A1-203ENST00000450867 OR5G3P0C626 314 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 FGF7P21781 194 aa10.6□□□□□ -0.71
COL3A1-203ENST00000450867 GALR1P47211 349 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms