RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 A6NHS1 94 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 CFDP00746 253 aaPredicted RBP12.81□□□□□ -0.36
FAM3A-216ENST00000449971 PAX9P55771 341 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
FAM3A-216ENST00000449971 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 SEC22CQ9BRL7 303 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
FAM3A-216ENST00000449971 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 CCSO14618 274 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 H2AFB2P0C5Z0 115 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 GATA2P23769 480 aaPredicted RBP12.8□□□□□ -0.36
FAM3A-216ENST00000449971 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 C1orf194Q5T5A4 169 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 OR8I2Q8N0Y5 310 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 BPIFCQ8NFQ6 507 aa12.8□□□□□ -0.36
FAM3A-216ENST00000449971 ZNF431Q8TF32 576 aaPredicted RBP12.8□□□□□ -0.36
FAM3A-216ENST00000449971 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
FAM3A-216ENST00000449971 CCNKO75909 580 aa12.79□□□□□ -0.36
FAM3A-216ENST00000449971 METTL15P1P0C7V9 234 aa12.79□□□□□ -0.36
FAM3A-216ENST00000449971 ORM2P19652 201 aa12.79□□□□□ -0.36
FAM3A-216ENST00000449971 RRAS2P62070 204 aaPredicted RBP12.79□□□□□ -0.36
FAM3A-216ENST00000449971 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
FAM3A-216ENST00000449971 TMEM182Q6ZP80 229 aaPredicted RBP12.79□□□□□ -0.36
FAM3A-216ENST00000449971 TMEM144Q7Z5S9 345 aa12.79□□□□□ -0.36
FAM3A-216ENST00000449971 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
FAM3A-216ENST00000449971 DNAH6Q9C0G6 4158 aa12.79□□□□□ -0.36
FAM3A-216ENST00000449971 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 PMS2P5A8MQ11 134 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 MBPP02686 304 aaPredicted RBP12.78□□□□□ -0.36
FAM3A-216ENST00000449971 SPP1P10451 314 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 TAS2R30P59541 319 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 TMEM14EPQ6UXP3 125 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 C12orf45Q8N5I9 185 aaPredicted RBP12.78□□□□□ -0.36
FAM3A-216ENST00000449971 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 LINC00052Q96N35 136 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 TBC1D24Q9ULP9 559 aa12.78□□□□□ -0.36
FAM3A-216ENST00000449971 L7N2F9 121 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 TSC22D2O75157 780 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 IL5P05113 134 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.37
FAM3A-216ENST00000449971 ID1P41134 155 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 VAMP2P63027 116 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 DLK1P80370 383 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 TMEM41BQ5BJD5 291 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 LGALS9CQ6DKI2 356 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.37
FAM3A-216ENST00000449971 SLC25A22Q9H936 323 aa12.77□□□□□ -0.37
FAM3A-216ENST00000449971 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
FAM3A-216ENST00000449971 ATF4P18848 351 aaPredicted RBP12.76□□□□□ -0.37
FAM3A-216ENST00000449971 ASAH1Q13510 395 aa12.76□□□□□ -0.37
FAM3A-216ENST00000449971 MGAT4CQ9UBM8 478 aa12.76□□□□□ -0.37
FAM3A-216ENST00000449971 SLC45A2Q9UMX9 530 aa12.76□□□□□ -0.37
FAM3A-216ENST00000449971 LSM5Q9Y4Y9 91 aaKnown RBP12.76□□□□□ -0.37
FAM3A-216ENST00000449971 C7orf66A4D0T2 115 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 DEFB4AO15263 64 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 C4BPBP20851 252 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 S100A7P31151 101 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 GALR1P47211 349 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 C2orf50Q96LR7 162 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 NPVFQ9HCQ7 196 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 PTTG2Q9NZH5 202 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 DOK5Q9P104 306 aa12.75□□□□□ -0.37
FAM3A-216ENST00000449971 H3BMM0 161 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 UPK1BO75841 260 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PSMB3P49720 205 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 BCAP31P51572 246 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 NUTF2P61970 127 aaKnown RBP12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PRR20EP86478 221 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PRR20CP86479 221 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PRR20DP86480 221 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PRR20BP86481 221 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 PRR20AP86496 221 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 SLC25A32Q9H2D1 315 aa12.74□□□□□ -0.37
FAM3A-216ENST00000449971 FNDC10F2Z333 226 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 K7EPK0 472 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 SOCS3O14543 225 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 HYPMO75409 117 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 OR5G3P0C626 314 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 DEFB1P60022 68 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 RAP2BP61225 183 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 SELENOTP62341 195 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 ARL16Q0P5N6 197 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 HIGD1AQ9Y241 93 aa12.73□□□□□ -0.37
FAM3A-216ENST00000449971 PKHD1P08F94 4074 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 ISLRO14498 428 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 LINC00869P0C866 280 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms