RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TRAV40A0A0B4J280 105 aa12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 GP9P14770 177 aa12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 MYCNOSP40205 109 aa12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 SOX21Q9Y651 276 aaPredicted RBP12.68□□□□□ -0.38
AP000253.1-201ENST00000449339 PEX7O00628 323 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 CNN1P51911 297 aaKnown RBP12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 TAS2R60P59551 318 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 HIST3H2BBQ8N257 126 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 Q8N9W7 124 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 FANCD2OSQ96PS1 177 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 PITPNC1Q9UKF7 332 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 V9GYV3 84 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 TENM4Q6N022 2769 aa12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 KMT2BQ9UMN6 2715 aaPredicted RBP12.67□□□□□ -0.38
AP000253.1-201ENST00000449339 IGLV11-55A0A075B6I3 123 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 GCGP01275 180 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 PDZD11Q5EBL8 140 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 SLC25A39Q9BZJ4 359 aaPredicted RBP12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 IGHV4-38-2P0DP08 117 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 MGST1P10620 155 aaKnown RBP12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 RNASE7Q9H1E1 156 aaKnown RBP12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 NIT2Q9NQR4 276 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
AP000253.1-201ENST00000449339 IGHV1-69DA0A0B4J2H0 117 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 IGHV1-69P01742 117 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 MSMBP08118 114 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 PAX1P15863 534 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 S100A2P29034 98 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 BRS3P32247 399 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 RPL15P61313 204 aaKnown RBP12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 OSTCQ9NRP0 149 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 MRPL27Q9P0M9 148 aaKnown RBP12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 S4R3C0 116 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 IGHV7-81A0A0B4J1V7 117 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 ISLRO14498 428 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 GNG5P63218 68 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 RPEL1Q2QD12 228 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
AP000253.1-201ENST00000449339 TRAV9-1A0A075B6T8 112 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 PGPA6NDG6 321 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 EGR2P11161 476 aaPredicted RBP12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 MAPK1IP1LQ8NDC0 245 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 C7orf69Q9H7B7 122 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 H3BTX0 84 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 GNG7O60262 68 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 TOMM40O96008 361 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 HIST1H1BP16401 226 aaKnown RBP12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 TMEM219Q86XT9 240 aa12.64□□□□□ -0.39
AP000253.1-201ENST00000449339 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 HLA-DRB1P01911 266 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 DSCR9P59020 149 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 BAGE2Q86Y30 109 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 RNF125Q96EQ8 232 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 HIF1ANQ9NWT6 349 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 THYN1Q9P016 225 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 TMEM14CQ9P0S9 112 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 DOPEY2Q9Y3R5 2298 aa12.63□□□□□ -0.39
AP000253.1-201ENST00000449339 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 AVPP01185 164 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 IL4P05112 153 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 MFAP4P55083 255 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 Q9H3A6 140 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 ZANQ9Y493 2812 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 UBE2G1P62253 170 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 OR8I2Q8N0Y5 310 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 C5orf17Q8NAS9 161 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 SHANK2-AS3Q9BTD1 123 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 C21orf62Q9NYP8 219 aa12.62□□□□□ -0.39
AP000253.1-201ENST00000449339 FABP4P15090 132 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 COA6Q5JTJ3 125 aaKnown RBP12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 OR10D4PQ8NGN7 298 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 RPH3ALQ9UNE2 315 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 NAV2Q8IVL1 2488 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 A0A096LNT2 108 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 LINC01548A6NM66 108 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 B4DSR2 109 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 F8W735 103 aaPredicted RBP12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 OR2J3O76001 311 aa12.61□□□□□ -0.39
AP000253.1-201ENST00000449339 HIST1H1EP10412 219 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms