RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PFDN2Q9UHV9 154 aa10.83□□□□□ -0.68
USP39-206ENST00000448971 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 SNRPGP15A8MWD9 76 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 DLK1P80370 383 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 BPIFCQ8NFQ6 507 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 FAM110AQ9BQ89 295 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 MAP6D1Q9H9H5 199 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 RETNQ9HD89 108 aa10.82□□□□□ -0.68
USP39-206ENST00000448971 TRAV2A0A0B4J234 112 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 CMC4P56277 68 aaPredicted RBP10.81□□□□□ -0.68
USP39-206ENST00000448971 RAB32Q13637 225 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 C16orf54Q6UWD8 224 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 LINC00322Q6ZN03 302 aaPredicted RBP10.81□□□□□ -0.68
USP39-206ENST00000448971 TMEM144Q7Z5S9 345 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 APRG1Q8IVJ8 170 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 MARVELD1Q9BSK0 173 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 U3KQE9 123 aa10.81□□□□□ -0.68
USP39-206ENST00000448971 BUB3O43684 328 aa10.8□□□□□ -0.68
USP39-206ENST00000448971 SSNA1O43805 119 aa10.8□□□□□ -0.68
USP39-206ENST00000448971 SIX6O95475 246 aa10.8□□□□□ -0.68
USP39-206ENST00000448971 CFDP00746 253 aaPredicted RBP10.8□□□□□ -0.68
USP39-206ENST00000448971 AP2S1P53680 142 aaPredicted RBP10.8□□□□□ -0.68
USP39-206ENST00000448971 APOC4P55056 127 aa10.8□□□□□ -0.68
USP39-206ENST00000448971 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
USP39-206ENST00000448971 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
USP39-206ENST00000448971 DEFB131AP59861 70 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 ZNF124Q15973 351 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 LRRC37A5PQ49AS3 106 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 LEMD1Q68G75 181 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 CYP2G1PQ6ZSU1 146 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 STX12Q86Y82 276 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 FAM24BQ8N5W8 94 aa10.79□□□□□ -0.68
USP39-206ENST00000448971 FAM24AA6NFZ4 105 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 K7EQG2 157 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 PTTG1O95997 202 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 ORM2P19652 201 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 TMEM217Q8N7C4 229 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 NPVFQ9HCQ7 196 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 NRN1Q9NPD7 142 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 LYRM2Q9NU23 88 aaPredicted RBP10.78□□□□□ -0.68
USP39-206ENST00000448971 DOK5Q9P104 306 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
USP39-206ENST00000448971 CST7O76096 145 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 LINC00869P0C866 280 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 S100A7P31151 101 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 RAP2BP61225 183 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 TEPPQ6URK8 271 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 DCANP1Q8TF63 244 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 GGACTQ9BVM4 153 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 NMES1Q9C002 83 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 C11orf1Q9H5F2 150 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
USP39-206ENST00000448971 IGSF23A1L1A6 192 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 DEDDO75618 318 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 RLN2P04090 185 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 SULT1A1P50225 295 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 SNRPD3P62318 126 aaKnown RBP10.76□□□□□ -0.69
USP39-206ENST00000448971 SELENOTP62341 195 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 HBG1P69891 147 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 HBG2P69892 147 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 CYCSP99999 105 aaKnown RBP10.76□□□□□ -0.69
USP39-206ENST00000448971 IL15RAQ13261 267 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 PSMG4Q5JS54 123 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 TMEM182Q6ZP80 229 aaPredicted RBP10.76□□□□□ -0.69
USP39-206ENST00000448971 ZNF546Q86UE3 836 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 OR8I2Q8N0Y5 310 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 STPG3Q8N7X2 389 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 KRTAP17-1Q9BYP8 105 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 SLC45A2Q9UMX9 530 aa10.76□□□□□ -0.69
USP39-206ENST00000448971 KIR2DL5BA0A0G2JN68 375 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 KIR2DL5BA0A0G2JPC4 375 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 OR5G3P0C626 314 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 DEFB135Q30KP9 77 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 C1orf194Q5T5A4 169 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 STHQ8IWL8 128 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 KIR2DL5AQ8N109 375 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 TMEM252Q8N6L7 170 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 KIR2DL5BQ8NHK3 375 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 UQCC1Q9NVA1 299 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 HIGD1AQ9Y241 93 aa10.75□□□□□ -0.69
USP39-206ENST00000448971 ALMS1Q8TCU4 4167 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 E5RGE8 158 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 PET100P0DJ07 73 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 GALR1P47211 349 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 H2BFSP57053 126 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 BAXQ07812 192 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 SCRT1Q9BWW7 348 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 SLC25A32Q9H2D1 315 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 ALG5Q9Y673 324 aa10.74□□□□□ -0.69
USP39-206ENST00000448971 FRAS1Q86XX4 4008 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms