RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FAM78BQ5VT40 261 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 DPPA3Q6W0C5 159 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 FAM213BQ8TBF2 198 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 TMEM190Q8WZ59 177 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 RAX2Q96IS3 184 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 UHRF2Q96PU4 802 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 CITED1Q99966 193 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 ACTR3CQ9C0K3 210 aaPredicted RBP14.97□□□□□ -0.01
SGCE-207ENST00000447873 MRPL27Q9P0M9 148 aaKnown RBP14.97□□□□□ -0.01
SGCE-207ENST00000447873 RABAC1Q9UI14 185 aa14.97□□□□□ -0.01
SGCE-207ENST00000447873 ZNF705EA8MWA4 302 aaPredicted RBP14.96□□□□□ -0.01
SGCE-207ENST00000447873 CCL24O00175 119 aa14.96□□□□□ -0.01
SGCE-207ENST00000447873 LINC00305Q7Z4B0 112 aa14.96□□□□□ -0.01
SGCE-207ENST00000447873 RNF2Q99496 336 aa14.96□□□□□ -0.01
SGCE-207ENST00000447873 SEPSECSQ9HD40 501 aaKnown RBP14.96□□□□□ -0.01
SGCE-207ENST00000447873 CDC34P49427 236 aaPredicted RBP14.95□□□□□ -0.02
SGCE-207ENST00000447873 SLURP1P55000 103 aa14.95□□□□□ -0.02
SGCE-207ENST00000447873 S100A7AQ86SG5 101 aa14.95□□□□□ -0.02
SGCE-207ENST00000447873 LRRC20Q8TCA0 184 aa14.95□□□□□ -0.02
SGCE-207ENST00000447873 METTL26Q96S19 204 aa14.95□□□□□ -0.02
SGCE-207ENST00000447873 SLC25A22Q9H936 323 aa14.95□□□□□ -0.02
SGCE-207ENST00000447873 ZNF207O43670 478 aaKnown RBP14.94□□□□□ -0.02
SGCE-207ENST00000447873 S100A7P31151 101 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 SYNJ2BPP57105 145 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 C1QL4Q86Z23 238 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 MRPL32Q9BYC8 188 aaKnown RBP14.94□□□□□ -0.02
SGCE-207ENST00000447873 FUT9Q9Y231 359 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 SEC14L6B5MCN3 397 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 RGS13O14921 159 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 NPPCP23582 126 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 FHL3Q13643 280 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 KLF5Q13887 457 aaPredicted RBP14.94□□□□□ -0.02
SGCE-207ENST00000447873 C12orf54Q6X4T0 127 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 REC114Q7Z4M0 266 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 RAB24Q969Q5 203 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 SLC25A39Q9BZJ4 359 aaPredicted RBP14.94□□□□□ -0.02
SGCE-207ENST00000447873 UFC1Q9Y3C8 167 aa14.94□□□□□ -0.02
SGCE-207ENST00000447873 CTXND1A0A1B0GTU2 59 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 LGALS9O00182 355 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 RAB14P61106 215 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 ZNF726P1Q15940 193 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 SPATA31B1PQ5VZV4 182 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 MIR17HGQ75NE6 70 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 C3orf56Q8N813 242 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 SAT2Q96F10 170 aaPredicted RBP14.93□□□□□ -0.02
SGCE-207ENST00000447873 DAZ1Q9NQZ3 744 aaKnown RBP14.93□□□□□ -0.02
SGCE-207ENST00000447873 PFDN2Q9UHV9 154 aa14.93□□□□□ -0.02
SGCE-207ENST00000447873 HMGB3O15347 200 aaKnown RBP14.92□□□□□ -0.02
SGCE-207ENST00000447873 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
SGCE-207ENST00000447873 H2AFB1P0C5Y9 115 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 BLOC1S1P78537 153 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 MORN5Q5VZ52 161 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 SSX7Q7RTT5 188 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 PCNPQ8WW12 178 aaKnown RBP14.92□□□□□ -0.02
SGCE-207ENST00000447873 SHANK2-AS3Q9BTD1 123 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 ZNF747Q9BV97 191 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 COL6A5A8TX70 2615 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 WNK1Q9H4A3 2382 aa14.92□□□□□ -0.02
SGCE-207ENST00000447873 K7EMT4 169 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 CRYBB3P26998 211 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 MYCNOSP40205 109 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 TAS2R45P59539 299 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 TM4SF20Q53R12 229 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 SFT2D1Q8WV19 159 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 NARS2Q96I59 477 aaKnown RBP14.91□□□□□ -0.02
SGCE-207ENST00000447873 SCRT1Q9BWW7 348 aa14.91□□□□□ -0.02
SGCE-207ENST00000447873 TECRQ9NZ01 308 aaKnown RBP14.91□□□□□ -0.02
SGCE-207ENST00000447873 IGHV3-49A0A0A0MS15 119 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 TRAV5A0A0B4J249 113 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 ZNF98A6NK75 572 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 H3BRN7 92 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 C8orf88P0DMB2 117 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 LEMD1Q68G75 181 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 LCN15Q6UWW0 184 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 DLX4Q92988 240 aaPredicted RBP14.9□□□□□ -0.02
SGCE-207ENST00000447873 MAP1LC3B2A6NCE7 125 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 A8MWP6 167 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 MAP1LC3BQ9GZQ8 125 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 PEMTQ9UBM1 199 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 RNF24Q9Y225 148 aa14.9□□□□□ -0.02
SGCE-207ENST00000447873 IGHV3OR16-13A0A075B7E8 117 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 IGHV3-74A0A0B4J1X5 117 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 TMEM213A2RRL7 107 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
SGCE-207ENST00000447873 NMBP08949 121 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 STAG3L2P0CL84 134 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 STAG3L3P0CL85 134 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 KHDC3LQ587J8 217 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 OR4F17Q8NGA8 305 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 MBD3L1Q8WWY6 194 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 OR4F4Q96R69 305 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 U3KQE9 123 aa14.89□□□□□ -0.03
SGCE-207ENST00000447873 STAB1Q9NY15 2570 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 IGHV3-66A0A0C4DH42 116 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 IGHV7-4-1A0A0J9YVY3 117 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 A0A1B0GV50 99 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 TEX46H3BTG2 121 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 BUB3O43684 328 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 PF4P02776 101 aa14.88□□□□□ -0.03
SGCE-207ENST00000447873 FGF8P55075 233 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 317.6 ms