RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF546Q86UE3 836 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 GBGT1Q8N5D6 347 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 UHRF2Q96PU4 802 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 SCRT1Q9BWW7 348 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 ARL6Q9H0F7 186 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 WFDC10AQ9H1F0 79 aa9.96□□□□□ -0.82
HLA-DOB-207ENST00000447394 CD7P09564 240 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 OR5G3P0C626 314 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 FAM90A2PQ658T7 463 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 RBPMS2Q6ZRY4 209 aaKnown RBP9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 OR2K2Q8NGT1 345 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 PPP1R14BQ96C90 147 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 RSG1Q9BU20 258 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 NPCDR1Q9BY65 106 aa9.95□□□□□ -0.82
HLA-DOB-207ENST00000447394 BUB3O43684 328 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 SELENOTP62341 195 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PRR20EP86478 221 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PRR20CP86479 221 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PRR20DP86480 221 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PRR20BP86481 221 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PRR20AP86496 221 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 GCSAMLQ5JQS6 135 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 WFDC3Q8IUB2 231 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 SLC25A22Q9H936 323 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
HLA-DOB-207ENST00000447394 H3BRN7 92 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 TSPAN4O14817 238 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 NUP62P37198 522 aaPredicted RBP9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 CD81P60033 236 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 B2MP61769 119 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 FAM24BQ8N5W8 94 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 INO80EQ8NBZ0 244 aaPredicted RBP9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 NARS2Q96I59 477 aaKnown RBP9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 SLC25A32Q9H2D1 315 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 MS4A6AQ9H2W1 248 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 UBQLN2Q9UHD9 624 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
HLA-DOB-207ENST00000447394 A0A1W2PS18 150 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 COX7A2P2O60397 106 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 HYPMO75409 117 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 RPL29P47914 159 aaKnown RBP9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 PLP1P60201 277 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 RAB31Q13636 194 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 SIGLEC15Q6ZMC9 328 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 Q8N1Y9 231 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 STXBP6Q8NFX7 210 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 TMEM37Q8WXS4 190 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 GRAMD2BQ96HH9 432 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 FAM210AQ96ND0 272 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 SLC25A39Q9BZJ4 359 aaPredicted RBP9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 ARV1Q9H2C2 271 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 TMEM231Q9H6L2 316 aa9.92□□□□□ -0.82
HLA-DOB-207ENST00000447394 TRAV25A0A0B4J276 109 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 ZNF98A6NK75 572 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 IFNA5P01569 189 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 CXCL2P19875 107 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 BMI1P35226 326 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 ZNF124Q15973 351 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 SPATA31B1PQ5VZV4 182 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 RPL7L1Q6DKI1 246 aaKnown RBP9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 TCTE3Q8IZS6 198 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 NEURL2Q9BR09 285 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 MFFQ9GZY8 342 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
HLA-DOB-207ENST00000447394 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 MPDU1O75352 247 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 EIF3GO75821 320 aaKnown RBP eCLIP9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 SNRPCP09234 159 aaKnown RBP9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 C10orf113Q5VZT2 155 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 LINC00305Q7Z4B0 112 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 OR8I2Q8N0Y5 310 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 DEFB125Q8N687 156 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 SCGB1C1Q8TD33 95 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 C17orf77Q96MU5 243 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 SH3BGRL3Q9H299 93 aa9.9□□□□□ -0.82
HLA-DOB-207ENST00000447394 OR4C46A6NHA9 309 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 FFAR4Q5NUL3 377 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 Q6ZRG5 221 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 ZNF709Q8N972 641 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 PARD6GQ9BYG4 376 aaPredicted RBP9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 CYTL1Q9NRR1 136 aa9.89□□□□□ -0.83
HLA-DOB-207ENST00000447394 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms