RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KCNIP2Q9NS61 270 aa13.66□□□□□ -0.22
TRAPPC4-203ENST00000447216 PKD1L1Q8TDX9 2849 aa13.66□□□□□ -0.22
TRAPPC4-203ENST00000447216 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 COX7A2P2O60397 106 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 HYPMO75409 117 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 CBLN1P23435 193 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 CRYBB3P26998 211 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 PLP1P60201 277 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 Q6ZRG5 221 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 WFDC9Q8NEX5 89 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 PPP1R14BQ96C90 147 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 UHRF2Q96PU4 802 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 ELOVL1Q9BW60 279 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 SLC25A32Q9H2D1 315 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 MRPL27Q9P0M9 148 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 SMPXQ9UHP9 88 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 HIGD1AQ9Y241 93 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 TIMM9Q9Y5J7 89 aa13.65□□□□□ -0.22
TRAPPC4-203ENST00000447216 SAP30O75446 220 aa13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 IGLL1P15814 213 aa13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 TMEM37Q8WXS4 190 aa13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 ST8SIA2Q92186 375 aa13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 U3KQE9 123 aa13.64□□□□□ -0.23
TRAPPC4-203ENST00000447216 C8orf88P0DMB2 117 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 PXDC1Q5TGL8 231 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 SCRT1Q9BWW7 348 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 MLXQ9UH92 298 aa13.63□□□□□ -0.23
TRAPPC4-203ENST00000447216 CHEK1O14757 476 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 RAB2AP61019 212 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 MORN5Q5VZ52 161 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 SPATA31B1PQ5VZV4 182 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 LEMD1Q68G75 181 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 SLC51BQ86UW2 128 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 DYNLRB2Q8TF09 96 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 MARC2Q969Z3 335 aa13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 SLC25A39Q9BZJ4 359 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-203ENST00000447216 H3BRN7 92 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 SPP1P10451 314 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 C4BPBP20851 252 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 EIF5AP63241 154 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 PRR31Q5SQ13 230 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 LINC00305Q7Z4B0 112 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 NARS2Q96I59 477 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 PLA2G2EQ9NZK7 142 aa13.61□□□□□ -0.23
TRAPPC4-203ENST00000447216 SORL1Q92673 2214 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 ZNF98A6NK75 572 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 EIF3GO75821 320 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 ACOT6Q3I5F7 207 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 C9orf66Q5T8R8 295 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 TMED6Q8WW62 240 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 PFDN5Q99471 154 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 RNF2Q99496 336 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 SHANK2-AS3Q9BTD1 123 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 SLC25A22Q9H936 323 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 SIGLEC8Q9NYZ4 499 aa13.6□□□□□ -0.23
TRAPPC4-203ENST00000447216 TRAV5A0A0B4J249 113 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 A0A1W2PS18 150 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 BUB3O43684 328 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 M6PRP20645 277 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 SERF2P84101 59 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 DEFB114Q30KQ6 69 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 FAM78BQ5VT40 261 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 FAM122CQ6P4D5 195 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 C16orf54Q6UWD8 224 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-203ENST00000447216 OXLD1Q5BKU9 147 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 TCF24Q7RTU0 167 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 OR10G4Q8NGN3 311 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 OR10G9Q8NGN4 311 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 OR10G7Q8NGN6 311 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 GLMPQ8WWB7 406 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 TMEM231Q9H6L2 316 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 SEPSECSQ9HD40 501 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 PFDN2Q9UHV9 154 aa13.58□□□□□ -0.24
TRAPPC4-203ENST00000447216 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 SEC11BP0C7V7 166 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 BMI1P35226 326 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 CD300EQ496F6 205 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 TMEM41BQ5BJD5 291 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 AKR1C8PQ5T2L2 129 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
TRAPPC4-203ENST00000447216 RPRMQ9NS64 109 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms