RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 PUS1Q9Y606 427 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC00578-204ENST00000446548 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF469Q96JG9 3925 aaPredicted RBP6.8□□□□□ -1.32
LINC00578-204ENST00000446548 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
LINC00578-204ENST00000446548 TRAV41A0A0B4J266 112 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 WI2-2373I1.2A0A1W2PRP0 233 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 F6UZH7 168 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 M0QZK8 103 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 M0R036 132 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 OR7C2O60412 319 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 HYPMO75409 117 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 IGHV3-23P01764 117 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 IGHG2P01859 326 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 IGF1P05019 195 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 PYYP10082 97 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 ORM2P19652 201 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 YPEL3P61236 119 aaPredicted RBP6.8□□□□□ -1.32
LINC00578-204ENST00000446548 LYZP61626 148 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 RHOGP84095 191 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 RHEBQ15382 184 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 LINC00305Q7Z4B0 112 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 OR51G1Q8NGK1 321 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 OR1B1Q8NGR6 318 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF502Q8TBZ5 544 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 VN1R17PQ8TDU5 208 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 C11orf52Q96A22 123 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 FXYD5Q96DB9 178 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 TVP23CQ96ET8 276 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 TXNDC17Q9BRA2 123 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 NIPSNAP3BQ9BS92 247 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 PARLQ9H300 379 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 SDF2L1Q9HCN8 221 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 MRPL27Q9P0M9 148 aaKnown RBP6.8□□□□□ -1.32
LINC00578-204ENST00000446548 PITPNC1Q9UKF7 332 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 ITPR3Q14573 2671 aa6.8□□□□□ -1.32
LINC00578-204ENST00000446548 TRAV30A0A087WSZ9 112 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 H3BRN7 92 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 PDE6DO43924 150 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 GNG7O60262 68 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 OR10J4P0C629 311 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 RD3LP0DJH9 198 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 GP9P14770 177 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 IER3P46695 156 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 BLCAPP62952 87 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 UBE2L3P68036 154 aaKnown RBP6.79□□□□□ -1.32
LINC00578-204ENST00000446548 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 Q56UQ5 140 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 C9orf152Q5JTZ5 239 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF491Q8N8L2 437 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
LINC00578-204ENST00000446548 RPUSD4Q96CM3 377 aaKnown RBP6.79□□□□□ -1.32
LINC00578-204ENST00000446548 TXN2Q99757 166 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 SMIM7Q9BQ49 75 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 PAXXQ9BUH6 204 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 PRDM13Q9H4Q3 707 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 RPS10P5Q9NQ39 176 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 THYN1Q9P016 225 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 LINC00527Q9UJ94 153 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 HIGD1AQ9Y241 93 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 CSPG4Q6UVK1 2322 aa6.79□□□□□ -1.32
LINC00578-204ENST00000446548 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF727A8MUV8 499 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 OR2C1O95371 312 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 FABP1P07148 127 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 CTSGP08311 255 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 PPIFP30405 207 aaKnown RBP6.78□□□□□ -1.32
LINC00578-204ENST00000446548 CFHR3Q02985 330 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 USF2Q15853 346 aaPredicted RBP6.78□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 C15orf32Q32M92 178 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 NECAP1Q8NC96 275 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 FOXC2Q99958 501 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 CHRDL1Q9BU40 450 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 DERL1Q9BUN8 251 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 SLC25A39Q9BZJ4 359 aaPredicted RBP6.78□□□□□ -1.32
LINC00578-204ENST00000446548 OR51M1Q9H341 326 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 NAT8Q9UHE5 227 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 ZNF580Q9UK33 172 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 TEX15Q9BXT5 2789 aa6.78□□□□□ -1.32
LINC00578-204ENST00000446548 TRBV20OR9-2A0A075B6H5 130 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 A0A087WWC5 75 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 A0A1W2PRE2 83 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 MRPS12O15235 138 aaKnown RBP6.77□□□□□ -1.33
LINC00578-204ENST00000446548 NDUFB4O95168 129 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 BRI3O95415 125 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 IL4P05112 153 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 GPR183P32249 361 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
LINC00578-204ENST00000446548 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
LINC00578-204ENST00000446548 TMEM241Q24JQ0 296 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
LINC00578-204ENST00000446548 Q6YL49 198 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms