RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 C2orf70A6NJV1 201 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 FOLR2P14207 255 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 SERF2P84101 59 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 GCSAMLQ5JQS6 135 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 IL34Q6ZMJ4 242 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 PSMG3Q9BT73 122 aaPredicted RBP13.25□□□□□ -0.29
SGCE-206ENST00000445866 WNK1Q9H4A3 2382 aa13.25□□□□□ -0.29
SGCE-206ENST00000445866 TMEM213A2RRL7 107 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 A8MWP6 167 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 CD33P20138 364 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 CBLN1P23435 193 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 CRYBB3P26998 211 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 WFDC9Q8NEX5 89 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 STOML3Q8TAV4 291 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 TMEM37Q8WXS4 190 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
SGCE-206ENST00000445866 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 ANK2Q01484 3957 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 APOHP02749 345 aaPredicted RBP13.24□□□□□ -0.29
SGCE-206ENST00000445866 CSN3P07498 182 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 SPP1P10451 314 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 EDN2P20800 178 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 ACOT6Q3I5F7 207 aaPredicted RBP13.24□□□□□ -0.29
SGCE-206ENST00000445866 ST8SIA2Q92186 375 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
SGCE-206ENST00000445866 S100A7P31151 101 aa13.23□□□□□ -0.29
SGCE-206ENST00000445866 GATAD1Q8WUU5 269 aa13.23□□□□□ -0.29
SGCE-206ENST00000445866 MARC2Q969Z3 335 aa13.23□□□□□ -0.29
SGCE-206ENST00000445866 UHRF2Q96PU4 802 aa13.23□□□□□ -0.29
SGCE-206ENST00000445866 PFDN5Q99471 154 aa13.23□□□□□ -0.29
SGCE-206ENST00000445866 A0A1W2PS18 150 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 MBP02144 154 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 SEC11BP0C7V7 166 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 C8orf88P0DMB2 117 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 M6PRP20645 277 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 EIF5AL1Q6IS14 154 aaKnown RBP13.22□□□□□ -0.29
SGCE-206ENST00000445866 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
SGCE-206ENST00000445866 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 U3KQE9 123 aa13.22□□□□□ -0.29
SGCE-206ENST00000445866 SEC14L6B5MCN3 397 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 CHEK1O14757 476 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 SAP30O75446 220 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 OR10G4Q8NGN3 311 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.29
SGCE-206ENST00000445866 ZNF98A6NK75 572 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 BMI1P35226 326 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 RAB2AP61019 212 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 FAM78BQ5VT40 261 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 LEMD1Q68G75 181 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 GRAMD2BQ96HH9 432 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 SHANK2-AS3Q9BTD1 123 aa13.21□□□□□ -0.3
SGCE-206ENST00000445866 VWFP04275 2813 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 A0A1W2PPV4 95 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 BUB3O43684 328 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
SGCE-206ENST00000445866 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 SLC25A22Q9H936 323 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 SEPSECSQ9HD40 501 aaKnown RBP13.2□□□□□ -0.3
SGCE-206ENST00000445866 RPRMQ9NS64 109 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 SIGLEC8Q9NYZ4 499 aa13.2□□□□□ -0.3
SGCE-206ENST00000445866 TRAV5A0A0B4J249 113 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 TMEM41BQ5BJD5 291 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 OR8I2Q8N0Y5 310 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 RNF2Q99496 336 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
SGCE-206ENST00000445866 IGLL1P15814 213 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 RHOBP62745 196 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 C1orf194Q5T5A4 169 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 SPATA31B1PQ5VZV4 182 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 FAM122CQ6P4D5 195 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
SGCE-206ENST00000445866 MLXQ9UH92 298 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 H3BRN7 92 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
SGCE-206ENST00000445866 MORN5Q5VZ52 161 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
SGCE-206ENST00000445866 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 FUT9Q9Y231 359 aa13.18□□□□□ -0.3
SGCE-206ENST00000445866 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
SGCE-206ENST00000445866 ACTR3CQ9C0K3 210 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms