RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 NPFFO15130 113 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 NBEAP1P0C6P0 100 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 ATP5J2P56134 94 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 LEMD1Q68G75 181 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 Q8N9W7 124 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 IGHV4-61A0A0C4DH41 118 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 PRB1P04280 392 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
RBM39-216ENST00000444878 MEOX2P50222 304 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 CNN1P51911 297 aaKnown RBP10.79□□□□□ -0.68
RBM39-216ENST00000444878 C10orf105Q8TEF2 133 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
RBM39-216ENST00000444878 CDC42EP3Q9UKI2 254 aa10.79□□□□□ -0.68
RBM39-216ENST00000444878 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 CENPVL3A0A0U1RRI6 287 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 SLC17A3O00476 420 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 PEX7O00628 323 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 GNG7O60262 68 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 GP9P14770 177 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 CDX1P47902 265 aaPredicted RBP10.78□□□□□ -0.68
RBM39-216ENST00000444878 TAS2R60P59551 318 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 IGF2BP2-AS1Q96M15 143 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 THYN1Q9P016 225 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 S4R3C0 116 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 MAP1AP78559 2803 aaPredicted RBP10.78□□□□□ -0.68
RBM39-216ENST00000444878 HLA-DRB1P01911 266 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 MFAP4P55083 255 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 PAX8Q06710 450 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 IL36BQ9NZH7 164 aa10.78□□□□□ -0.68
RBM39-216ENST00000444878 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 PGPA6NDG6 321 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 TOMM40O96008 361 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 GCGP01275 180 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
RBM39-216ENST00000444878 MGST1P10620 155 aaKnown RBP10.77□□□□□ -0.69
RBM39-216ENST00000444878 MYCNOSP40205 109 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 TMEM68Q96MH6 324 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
RBM39-216ENST00000444878 FAM208BQ5VWN6 2430 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.69
RBM39-216ENST00000444878 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.69
RBM39-216ENST00000444878 IGLV2-8P01709 118 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 CLEC3BP05452 202 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
RBM39-216ENST00000444878 ACTL10Q5JWF8 245 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 VWC2LB2RUY7 222 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 IL4P05112 153 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 GNG5P63218 68 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 SRSF2Q01130 221 aaKnown RBP10.76□□□□□ -0.69
RBM39-216ENST00000444878 Q56UQ5 140 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 RNASE7Q9H1E1 156 aaKnown RBP10.76□□□□□ -0.69
RBM39-216ENST00000444878 OSTCQ9NRP0 149 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 C21orf62Q9NYP8 219 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 EPDR1Q9UM22 224 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 V9GYV3 84 aa10.76□□□□□ -0.69
RBM39-216ENST00000444878 H3BTX0 84 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 OR2J3O76001 311 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 HIST1H1BP16401 226 aaKnown RBP10.75□□□□□ -0.69
RBM39-216ENST00000444878 RPEL1Q2QD12 228 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 IBA57Q5T440 356 aaKnown RBP10.75□□□□□ -0.69
RBM39-216ENST00000444878 BAGE2Q86Y30 109 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 ZNF48Q96MX3 618 aaPredicted RBP10.75□□□□□ -0.69
RBM39-216ENST00000444878 BBC3Q96PG8 261 aaPredicted RBP10.75□□□□□ -0.69
RBM39-216ENST00000444878 HSPB9Q9BQS6 159 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 TMEM14CQ9P0S9 112 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 PITPNC1Q9UKF7 332 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 IGHV3OR16-10A0A075B7F0 116 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 IGHV4-30-2A0A087WSY4 118 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 ISLRO14498 428 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 YPEL3P61236 119 aaPredicted RBP10.75□□□□□ -0.69
RBM39-216ENST00000444878 UBE2G1P62253 170 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 GFI1BQ5VTD9 330 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 Q9H3A6 140 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 RPH3ALQ9UNE2 315 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 TRAPPC1Q9Y5R8 145 aa10.75□□□□□ -0.69
RBM39-216ENST00000444878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.74□□□□□ -0.692e-9■■■□□ 15
RBM39-216ENST00000444878 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 NDUFB8O95169 186 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
RBM39-216ENST00000444878 S100A2P29034 98 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 ECSCRQ19T08 205 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 C5orf17Q8NAS9 161 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 GAR1Q9NY12 217 aaKnown RBP10.74□□□□□ -0.69
RBM39-216ENST00000444878 CELSR2Q9HCU4 2923 aa10.74□□□□□ -0.69
RBM39-216ENST00000444878 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
RBM39-216ENST00000444878 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms