RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TMEM147Q9BVK8 224 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 SRD5A3Q9H8P0 318 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 OR5AC2Q9NZP5 309 aa8.1□□□□□ -1.11
HDAC6-211ENST00000443563 ORM2P19652 201 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 TFPI2P48307 235 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 RAP2BP61225 183 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC6-211ENST00000443563 FGL1Q08830 312 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 GBGT1Q8N5D6 347 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 STXBP6Q8NFX7 210 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 OR1B1Q8NGR6 318 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 ZMAT4Q9H898 229 aa8.09□□□□□ -1.11
HDAC6-211ENST00000443563 H0YIZ8 118 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 AGPAT2O15120 278 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 MPDU1O75352 247 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 HYPMO75409 117 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 LINC00869P0C866 280 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 GATA2P23769 480 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-211ENST00000443563 CAMLGP49069 296 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 PLP1P60201 277 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 FCN2Q15485 313 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 ODF3L2Q3SX64 289 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 SAMD13Q5VXD3 122 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 OR8I2Q8N0Y5 310 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 STPG3Q8N7X2 389 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 THAP6Q8TBB0 222 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 GPR82Q96P67 336 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 SEPSECSQ9HD40 501 aaKnown RBP8.08□□□□□ -1.12
HDAC6-211ENST00000443563 UBQLN2Q9UHD9 624 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 HIGD1AQ9Y241 93 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 WDR83OSQ9Y284 106 aa8.08□□□□□ -1.12
HDAC6-211ENST00000443563 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-211ENST00000443563 LOC102724200A0A096LPH7 203 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-211ENST00000443563 UBE2L5PA0A1B0GUS4 154 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 K7EQG2 157 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 GIPP09681 153 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-211ENST00000443563 OR5G3P0C626 314 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 CXCL3P19876 107 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 GALR1P47211 349 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 NHLH2Q02577 135 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 TMEM182Q6ZP80 229 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-211ENST00000443563 Q6ZRG5 221 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 SBSPONQ8IVN8 264 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 OR11H7Q8NGC8 314 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 OR5C1Q8NGR4 320 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 MGST2Q99735 147 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 ASCL2Q99929 193 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 RNF126Q9BV68 326 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 ARL6Q9H0F7 186 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 WFDC10AQ9H1F0 79 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
HDAC6-211ENST00000443563 HUWE1Q7Z6Z7 4374 aaKnown RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 ZNF98A6NK75 572 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 COX7A2P2O60397 106 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 LYL1P12980 280 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 FGF7P21781 194 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 RPL12P30050 165 aaKnown RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 RPL29P47914 159 aaKnown RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 MEOX2P50222 304 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 APOC4P55056 127 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 SNRPD3P62318 126 aaKnown RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 LINC00322Q6ZN03 302 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 OR1L4Q8NGR5 311 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 PFDN5Q99471 154 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 SLC25A39Q9BZJ4 359 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-211ENST00000443563 SLC25A22Q9H936 323 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 KCNIP2Q9NS61 270 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 MBD2Q9UBB5 411 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 HSPB11Q9Y547 144 aa8.06□□□□□ -1.12
HDAC6-211ENST00000443563 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
HDAC6-211ENST00000443563 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
HDAC6-211ENST00000443563 H3BRN7 92 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
HDAC6-211ENST00000443563 RPL7P18124 248 aaKnown RBP8.05□□□□□ -1.12
HDAC6-211ENST00000443563 ID1P41134 155 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 HAGHQ16775 308 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 ZNF709Q8N972 641 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 SPATA25Q9BR10 227 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 TM2D3Q9BRN9 247 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 SHANK2-AS3Q9BTD1 123 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 DOK5Q9P104 306 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
HDAC6-211ENST00000443563 C17orf112F2Z3M2 114 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 IFNA5P01569 189 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 DEFB131AP59861 70 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 PRR20EP86478 221 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 PRR20CP86479 221 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 PRR20DP86480 221 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 PRR20BP86481 221 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 PRR20AP86496 221 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 CLINT1Q14677 625 aa8.04□□□□□ -1.12
HDAC6-211ENST00000443563 OPCMLQ14982 345 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms