RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-210	ENST00000442216	LRRC37A5P	Q49AS3	106 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	PXDC1	Q5TGL8	231 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	SIGLEC15	Q6ZMC9	328 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	S100A7A	Q86SG5	101 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	STXBP6	Q8NFX7	210 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	DCANP1	Q8TF63	244 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	ZMAT4	Q9H898	229 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	SEPSECS	Q9HD40	501 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	UQCC1	Q9NVA1	299 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	UBQLN2	Q9UHD9	624 aa		11.18	□□□□□ -0.62
CSNK1E-210	ENST00000442216	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216		H0YIZ8	118 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	MPC2	O95563	127 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	GATA2	P23769	480 aa	Predicted RBP	11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	BAX	Q07812	192 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	RAB31	Q13636	194 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	OXA1L	Q15070	435 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	ZNF546	Q86UE3	836 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	TMEM217	Q8N7C4	229 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	STPG3	Q8N7X2	389 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	PPP1R14B	Q96C90	147 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	CITED4	Q96RK1	184 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	TMEM147	Q9BVK8	224 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	MED28	Q9H204	178 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	MAP6D1	Q9H9H5	199 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	OR5AC2	Q9NZP5	309 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216		U3KQK5	164 aa		11.17	□□□□□ -0.62
CSNK1E-210	ENST00000442216	AGPAT2	O15120	278 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	LINC00869	P0C866	280 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	ORM2	P19652	201 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	WFDC3	Q8IUB2	231 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	OR1B1	Q8NGR6	318 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	CHAC2	Q8WUX2	184 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	ASB13	Q8WXK3	278 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	GPR82	Q96P67	336 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	SPATA25	Q9BR10	227 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	RNF126	Q9BV68	326 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	GGTLC1	Q9BX51	225 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	NRN1	Q9NPD7	142 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	RNF24	Q9Y225	148 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	WDR83OS	Q9Y284	106 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	COL7A1	Q02388	2944 aa		11.16	□□□□□ -0.62
CSNK1E-210	ENST00000442216	ZNF98	A6NK75	572 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	HYPM	O75409	117 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	CXCL3	P19876	107 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	RAP2B	P61225	183 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	OR8I2	Q8N0Y5	310 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	MGST2	Q99735	147 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	HIGD1A	Q9Y241	93 aa		11.15	□□□□□ -0.62
CSNK1E-210	ENST00000442216	KIR2DL5B	A0A0G2JN68	375 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	KIR2DL5B	A0A0G2JPC4	375 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	MPDU1	O75352	247 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	LYL1	P12980	280 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	CAMLG	P49069	296 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	NHLH2	Q02577	135 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	SAMD13	Q5VXD3	122 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	KIR2DL5A	Q8N109	375 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	KIR2DL5B	Q8NHK3	375 aa		11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-210	ENST00000442216		H3BRN7	92 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	GALR1	P47211	349 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	RPL29	P47914	159 aa	Known RBP	11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	APOC4	P55056	127 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	DEFB131A	P59861	70 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	SNRPD3	P62318	126 aa	Known RBP	11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	FCN2	Q15485	313 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	APRG1	Q8IVJ8	170 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	FAM24B	Q8N5W8	94 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	OR11H7	Q8NGC8	314 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	OR5C1	Q8NGR4	320 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	RCHY1	Q96PM5	261 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	SHANK2-AS3	Q9BTD1	123 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	ARL6	Q9H0F7	186 aa		11.13	□□□□□ -0.63
CSNK1E-210	ENST00000442216	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	UBE2L5P	A0A1B0GUS4	154 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	UBE2C	O00762	179 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	OR5G3	P0C626	314 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	MEOX2	P50222	304 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	PRR20E	P86478	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	PRR20C	P86479	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	PRR20D	P86480	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	PRR20B	P86481	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	PRR20A	P86496	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	FGL1	Q08830	312 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216		Q6ZRG5	221 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	THAP6	Q8TBB0	222 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	ARV1	Q9H2C2	271 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	SLC25A32	Q9H2D1	315 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	MBD2	Q9UBB5	411 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	HSPB11	Q9Y547	144 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	AGRN	O00468	2067 aa		11.12	□□□□□ -0.63
CSNK1E-210	ENST00000442216	GIP	P09681	153 aa	Predicted RBP	11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	ZNF688	P0C7X2	276 aa		11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	RPL7	P18124	248 aa	Known RBP	11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	FGF7	P21781	194 aa		11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	RPL12	P30050	165 aa	Known RBP	11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	ID1	P41134	155 aa		11.11	□□□□□ -0.63
CSNK1E-210	ENST00000442216	OPCML	Q14982	345 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms