RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KLF12Q9Y4X4 402 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 CADP27708 2225 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 CHD6Q8TD26 2715 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 A6NDN8 102 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 COX7A2P2O60397 106 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
LTBR-203ENST00000441074 FOXE3Q13461 319 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 OR1L4Q8NGR5 311 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 GTSF1Q8WW33 167 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 DPF1Q92782 380 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 PGLYRP4Q96LB8 373 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 GPR82Q96P67 336 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 PLSCR4Q9NRQ2 329 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 LRBAP50851 2863 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 IGKV1D-17A0A075B6S4 117 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 TEX50A0A1B0GTY4 177 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 SAA2P0DJI9 122 aaPredicted RBP9.58□□□□□ -0.88
LTBR-203ENST00000441074 CT45A1Q5HYN5 189 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 C10orf113Q5VZT2 155 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 RBPMS2Q6ZRY4 209 aaKnown RBP9.58□□□□□ -0.88
LTBR-203ENST00000441074 C5orf17Q8NAS9 161 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 CT45A3Q8NHU0 189 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 FXYD5Q96DB9 178 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 ZNF492Q9P255 531 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 PROCRQ9UNN8 238 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 ROS1P08922 2347 aa9.58□□□□□ -0.88
LTBR-203ENST00000441074 SRRM4A7MD48 611 aaKnown RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 FABP6P51161 128 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 GNG5P63218 68 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 RBPJQ06330 500 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 FAM27E3Q08E93 113 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 WFDC8Q8IUA0 241 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 JMJD8Q96S16 334 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 CALYQ9NYX4 217 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 H0Y8G0 127 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 CHEK1O14757 476 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 P01737 135 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 CEACAM3P40198 252 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 PATE2Q6UY27 113 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 LINC00322Q6ZN03 302 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 FAM169BQ8N8A8 192 aa9.57□□□□□ -0.88
LTBR-203ENST00000441074 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 NEU4Q8WWR8 484 aaPredicted RBP9.57□□□□□ -0.88
LTBR-203ENST00000441074 MOSP00540 346 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 CGB3P0DN86 165 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 CGB7P0DN87 165 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 FGF6P10767 208 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 ZNF138P52744 262 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 UTF1Q5T230 341 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 OR2Z1Q8NG97 314 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 LEAP2Q969E1 77 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 TMEM186Q96B77 213 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.56□□□□□ -0.88
LTBR-203ENST00000441074 H3BUT2 72 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 SNAI2O43623 268 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 FSTL3O95633 263 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
LTBR-203ENST00000441074 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 LGALS7P47929 136 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 UQCRFS1P47985 274 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 ZNF137PP52743 207 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 TMEM30BQ3MIR4 351 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 ZGRF1Q86YA3 2104 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 OR10AG1Q8NH19 301 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
LTBR-203ENST00000441074 IGHV1-18A0A0C4DH31 117 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 HAX1O00165 279 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 NDUFS8O00217 210 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 C1orf185Q5T7R7 199 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 GFRALQ6UXV0 394 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 PDPNQ86YL7 162 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 TEX45Q8NA69 505 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 OR1N2Q8NGR9 330 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 COL6A6A6NMZ7 2263 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 ICE1Q9Y2F5 2266 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 SVEP1Q4LDE5 3571 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 A0A0G2JLM5 398 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 PGPA6NDG6 321 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 BHLHA15Q7RTS1 189 aaPredicted RBP9.55□□□□□ -0.88
LTBR-203ENST00000441074 STXBP6Q8NFX7 210 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 FAM57AQ8TBR7 257 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 TNFRSF14Q92956 283 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
LTBR-203ENST00000441074 FMC1Q96HJ9 113 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 BBC3Q96PG8 261 aaPredicted RBP9.55□□□□□ -0.88
LTBR-203ENST00000441074 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 RABAC1Q9UI14 185 aa9.55□□□□□ -0.88
LTBR-203ENST00000441074 A0A0G2JNJ9 132 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms