RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZNF546Q86UE3 836 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 TMEM217Q8N7C4 229 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 TMEM147Q9BVK8 224 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 MED28Q9H204 178 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 UQCC1Q9NVA1 299 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 OR5AC2Q9NZP5 309 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 UBQLN2Q9UHD9 624 aa8.8□□□□□ -1
HSPG2-206ENST00000439717 DNAH9Q9NYC9 4486 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 RBMY1BA6NDE4 496 aaKnown RBP8.79□□□□□ -1
HSPG2-206ENST00000439717 RBMY1EA6NEQ0 496 aaKnown RBP8.79□□□□□ -1
HSPG2-206ENST00000439717 K7EQG2 157 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 MPC2O95563 127 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 RBMY1DP0C7P1 496 aaKnown RBP8.79□□□□□ -1
HSPG2-206ENST00000439717 ORM2P19652 201 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 GATA2P23769 480 aaPredicted RBP8.79□□□□□ -1
HSPG2-206ENST00000439717 BAXQ07812 192 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 PXDC1Q5TGL8 231 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 S100A7AQ86SG5 101 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 WFDC3Q8IUB2 231 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 STXBP6Q8NFX7 210 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 PPP1R14BQ96C90 147 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 RNF126Q9BV68 326 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 ZMAT4Q9H898 229 aa8.79□□□□□ -1
HSPG2-206ENST00000439717 LOC102724200A0A096LPH7 203 aaPredicted RBP8.78□□□□□ -1
HSPG2-206ENST00000439717 AGPAT2O15120 278 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 HYPMO75409 117 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 LINC00869P0C866 280 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 CXCL3P19876 107 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 RAP2BP61225 183 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 EWSR1Q01844 656 aaKnown RBP eCLIP8.78□□□□□ -1
HSPG2-206ENST00000439717 HAGHQ16775 308 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 STPG3Q8N7X2 389 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 OR1B1Q8NGR6 318 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 DCANP1Q8TF63 244 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 ASB13Q8WXK3 278 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 MGST2Q99735 147 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 TM2D3Q9BRN9 247 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 GGTLC1Q9BX51 225 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 MAP6D1Q9H9H5 199 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 SEPSECSQ9HD40 501 aaKnown RBP8.78□□□□□ -1
HSPG2-206ENST00000439717 NRN1Q9NPD7 142 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 WDR83OSQ9Y284 106 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 COL7A1Q02388 2944 aa8.78□□□□□ -1
HSPG2-206ENST00000439717 ZNF98A6NK75 572 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 MPDU1O75352 247 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 LYL1P12980 280 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 CAMLGP49069 296 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 NHLH2Q02577 135 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 FCN2Q15485 313 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 OR11H7Q8NGC8 314 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 GPR82Q96P67 336 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 CITED4Q96RK1 184 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 ARL6Q9H0F7 186 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 RNF24Q9Y225 148 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 HIGD1AQ9Y241 93 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 U3KQK5 164 aa8.77□□□□□ -1.01
HSPG2-206ENST00000439717 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 H3BRN7 92 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 SAMD13Q5VXD3 122 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 APRG1Q8IVJ8 170 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 FAM24BQ8N5W8 94 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 OR5C1Q8NGR4 320 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 THAP6Q8TBB0 222 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 SPATA25Q9BR10 227 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 SHANK2-AS3Q9BTD1 123 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
HSPG2-206ENST00000439717 DOK5Q9P104 306 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 MBD2Q9UBB5 411 aa8.76□□□□□ -1.01
HSPG2-206ENST00000439717 ELOA3CA0A087WX78 387 aaPredicted RBP8.75□□□□□ -1.01
HSPG2-206ENST00000439717 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 GIPP09681 153 aaPredicted RBP8.75□□□□□ -1.01
HSPG2-206ENST00000439717 OR5G3P0C626 314 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 FGF7P21781 194 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 RPL12P30050 165 aaKnown RBP8.75□□□□□ -1.01
HSPG2-206ENST00000439717 GALR1P47211 349 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 RPL29P47914 159 aaKnown RBP8.75□□□□□ -1.01
HSPG2-206ENST00000439717 MEOX2P50222 304 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 APOC4P55056 127 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 DEFB131AP59861 70 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 SNRPD3P62318 126 aaKnown RBP8.75□□□□□ -1.01
HSPG2-206ENST00000439717 FGL1Q08830 312 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 OPCMLQ14982 345 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 Q6ZRG5 221 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 KIR2DL5BQ8NHK3 375 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 ARV1Q9H2C2 271 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 SLC25A32Q9H2D1 315 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 SLC25A22Q9H936 323 aa8.75□□□□□ -1.01
HSPG2-206ENST00000439717 UBE2CO00762 179 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 COX7A2P2O60397 106 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 ZNF688P0C7X2 276 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
HSPG2-206ENST00000439717 PRR20EP86478 221 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 PRR20CP86479 221 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 PRR20DP86480 221 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 PRR20BP86481 221 aa8.74□□□□□ -1.01
HSPG2-206ENST00000439717 PRR20AP86496 221 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms