RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LGALS9O00182 355 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 MYCNOSP40205 109 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 GCSAMLQ5JQS6 135 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 FAM74A1Q5RGS3 127 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 UNQ9165/PRO28630Q6UXU0 137 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 ZNF767PQ75MW2 155 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 C3orf56Q8N813 242 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 RNF141Q8WVD5 230 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 DUX3Q96PT4 197 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 METTL26Q96S19 204 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 MRPL32Q9BYC8 188 aaKnown RBP15.86■□□□□ 0.13
CHD3-204ENST00000439235 VSIRQ9H7M9 311 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 RPRMQ9NS64 109 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 MRPL27Q9P0M9 148 aaKnown RBP15.86■□□□□ 0.13
CHD3-204ENST00000439235 PFDN2Q9UHV9 154 aa15.86■□□□□ 0.13
CHD3-204ENST00000439235 SLURP1P55000 103 aa15.85■□□□□ 0.13
CHD3-204ENST00000439235 RHOBP62745 196 aa15.85■□□□□ 0.13
CHD3-204ENST00000439235 FAM122CQ6P4D5 195 aa15.85■□□□□ 0.13
CHD3-204ENST00000439235 ACTR3CQ9C0K3 210 aaPredicted RBP15.85■□□□□ 0.13
CHD3-204ENST00000439235 PLA2G2EQ9NZK7 142 aa15.85■□□□□ 0.13
CHD3-204ENST00000439235 RNF24Q9Y225 148 aa15.85■□□□□ 0.13
CHD3-204ENST00000439235 IGHV3OR16-8A0A075B7F1 116 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 A0A1W2PPV4 95 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 K7EMT4 169 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 CDC34P49427 236 aaPredicted RBP15.84■□□□□ 0.13
CHD3-204ENST00000439235 SYNJ2BPP57105 145 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 IFITM2Q01629 132 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 KLF5Q13887 457 aaPredicted RBP15.84■□□□□ 0.13
CHD3-204ENST00000439235 FAM78BQ5VT40 261 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 SHISA2Q6UWI4 295 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 PATE2Q6UY27 113 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 OR4F17Q8NGA8 305 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 SPATA3Q8NHX4 192 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 FAM213BQ8TBF2 198 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 LRRC20Q8TCA0 184 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 TMEM37Q8WXS4 190 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 NARS2Q96I59 477 aaKnown RBP15.84■□□□□ 0.13
CHD3-204ENST00000439235 OR4F4Q96R69 305 aa15.84■□□□□ 0.13
CHD3-204ENST00000439235 DAZ1Q9NQZ3 744 aaKnown RBP15.84■□□□□ 0.13
CHD3-204ENST00000439235 A8MWP6 167 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 SEC14L6B5MCN3 397 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 NPPCP23582 126 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 LINC00305Q7Z4B0 112 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 RPP25LQ8N5L8 163 aaKnown RBP15.83■□□□□ 0.12
CHD3-204ENST00000439235 SLC25A22Q9H936 323 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 PEMTQ9UBM1 199 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 FUT9Q9Y231 359 aa15.83■□□□□ 0.12
CHD3-204ENST00000439235 H3BRN7 92 aa15.82■□□□□ 0.12
CHD3-204ENST00000439235 PF4P02776 101 aa15.82■□□□□ 0.12
CHD3-204ENST00000439235 UHRF2Q96PU4 802 aa15.82■□□□□ 0.12
CHD3-204ENST00000439235 SHANK2-AS3Q9BTD1 123 aa15.82■□□□□ 0.12
CHD3-204ENST00000439235 SLC25A39Q9BZJ4 359 aaPredicted RBP15.82■□□□□ 0.12
CHD3-204ENST00000439235 CTXND1A0A1B0GTU2 59 aa15.81■□□□□ 0.12
CHD3-204ENST00000439235 ZNF705EA8MWA4 302 aaPredicted RBP15.81■□□□□ 0.12
CHD3-204ENST00000439235 ZNF207O43670 478 aaKnown RBP15.81■□□□□ 0.12
CHD3-204ENST00000439235 CRYBB3P26998 211 aa15.81■□□□□ 0.12
CHD3-204ENST00000439235 BMI1P35226 326 aa15.81■□□□□ 0.12
CHD3-204ENST00000439235 TAS2R45P59539 299 aa15.81■□□□□ 0.12
CHD3-204ENST00000439235 DLX4Q92988 240 aaPredicted RBP15.81■□□□□ 0.12
CHD3-204ENST00000439235 SEPSECSQ9HD40 501 aaKnown RBP15.81■□□□□ 0.12
CHD3-204ENST00000439235 FHITP49789 147 aa15.8■□□□□ 0.12
CHD3-204ENST00000439235 BLOC1S1P78537 153 aa15.8■□□□□ 0.12
CHD3-204ENST00000439235 RAB24Q969Q5 203 aa15.8■□□□□ 0.12
CHD3-204ENST00000439235 SAT2Q96F10 170 aaPredicted RBP15.8■□□□□ 0.12
CHD3-204ENST00000439235 TECRQ9NZ01 308 aaKnown RBP15.8■□□□□ 0.12
CHD3-204ENST00000439235 IGHV7-4-1A0A0J9YVY3 117 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 A0A1W2PS18 150 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 TMEM213A2RRL7 107 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 C8orf88P0DMB2 117 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 TM4SF20Q53R12 229 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 KHDC3LQ587J8 217 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 SPATA31B1PQ5VZV4 182 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 MIR17HGQ75NE6 70 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 OR9G4Q8NGQ1 327 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 MARC2Q969Z3 335 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 GRAMD2BQ96HH9 432 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 SCRT1Q9BWW7 348 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 TMEM231Q9H6L2 316 aa15.79■□□□□ 0.12
CHD3-204ENST00000439235 ZNF98A6NK75 572 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 M0QZ24 198 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 OVOL1O14753 267 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 RGS13O14921 159 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 H2AFB1P0C5Y9 115 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 RAB14P61106 215 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 ZNF726P1Q15940 193 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 C1orf194Q5T5A4 169 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 U3KQE9 123 aa15.78■□□□□ 0.12
CHD3-204ENST00000439235 MAP1LC3B2A6NCE7 125 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 C2orf70A6NJV1 201 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 TEX46H3BTG2 121 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 MORN5Q5VZ52 161 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 STXBP6Q8NFX7 210 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 MBD3L1Q8WWY6 194 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 MAP1LC3BQ9GZQ8 125 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 SMPXQ9UHP9 88 aa15.77■□□□□ 0.12
CHD3-204ENST00000439235 BUB3O43684 328 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 HBE1P02100 147 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 STAG3L2P0CL84 134 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 STAG3L3P0CL85 134 aa15.76■□□□□ 0.11
CHD3-204ENST00000439235 LCN15Q6UWW0 184 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms