RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C2orf50Q96LR7 162 aa18.2■□□□□ 0.5
RAPGEF1-206ENST00000438647 GPN1Q9HCN4 374 aaPredicted RBP18.2■□□□□ 0.5
RAPGEF1-206ENST00000438647 ZFAND6Q6FIF0 208 aa18.19■□□□□ 0.5
RAPGEF1-206ENST00000438647 NPVFQ9HCQ7 196 aa18.19■□□□□ 0.5
RAPGEF1-206ENST00000438647 RRAS2P62070 204 aaPredicted RBP18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 SELENOTP62341 195 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 PSMG4Q5JS54 123 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 CYP2G1PQ6ZSU1 146 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 OR8I2Q8N0Y5 310 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 GATAD1Q8WUU5 269 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 GGACTQ9BVM4 153 aa18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 LSM5Q9Y4Y9 91 aaKnown RBP18.18■□□□□ 0.5
RAPGEF1-206ENST00000438647 K7EPK0 472 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 CCNKO75909 580 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 CA1P00915 261 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 PVALBP20472 110 aaPredicted RBP18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 DEFA1P59665 94 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 DEFA3P59666 94 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 IFITM3Q01628 133 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 TMEM147Q9BVK8 224 aa18.17■□□□□ 0.5
RAPGEF1-206ENST00000438647 ORM2P19652 201 aa18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 GATA2P23769 480 aaPredicted RBP18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 TMEM41BQ5BJD5 291 aa18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 SAMD13Q5VXD3 122 aa18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 TRPT1Q86TN4 253 aaKnown RBP18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 CSMD3Q7Z407 3707 aa18.16■□□□□ 0.5
RAPGEF1-206ENST00000438647 STARD9Q9P2P6 4700 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 PRAF2O60831 178 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 SPP1P10451 314 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 ACTL10Q5JWF8 245 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 MORN3Q6PF18 240 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 TEPPQ6URK8 271 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 NRARPQ7Z6K4 114 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 OR1B1Q8NGR6 318 aa18.15■□□□□ 0.5
RAPGEF1-206ENST00000438647 KNCNA6PVL3 124 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 ID1P41134 155 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 GALR1P47211 349 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 BCAP31P51572 246 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 CAV2P51636 162 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 TMEM182Q6ZP80 229 aaPredicted RBP18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 S100A7AQ86SG5 101 aa18.14■□□□□ 0.49
RAPGEF1-206ENST00000438647 A0A0J9YWU9 116 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 ZNF98A6NK75 572 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 INMT-MINDY4F8WBC2 141 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 DEDDO75618 318 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 MEOX2P50222 304 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 S100A10P60903 97 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 RAP2BP61225 183 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 TMEM217Q8N7C4 229 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 GPR82Q96P67 336 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 RARRES2Q99969 163 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 SLC25A22Q9H936 323 aa18.13■□□□□ 0.49
RAPGEF1-206ENST00000438647 LINC00869P0C866 280 aa18.12■□□□□ 0.49
RAPGEF1-206ENST00000438647 PSMB3P49720 205 aa18.12■□□□□ 0.49
RAPGEF1-206ENST00000438647 HYPMO75409 117 aa18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 ATF4P18848 351 aaPredicted RBP18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 PLP1P60201 277 aa18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 ARL16Q0P5N6 197 aa18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 SLC25A32Q9H2D1 315 aa18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 HIGD1AQ9Y241 93 aa18.11■□□□□ 0.49
RAPGEF1-206ENST00000438647 NUTF2P61970 127 aaKnown RBP18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 SLC38A11Q08AI6 406 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 IL15RAQ13261 267 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 RAB32Q13637 225 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 ZNF546Q86UE3 836 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 OR11H2Q8NH07 326 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 MARVELD1Q9BSK0 173 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 C11orf1Q9H5F2 150 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 DOK5Q9P104 306 aa18.1■□□□□ 0.49
RAPGEF1-206ENST00000438647 ISLRO14498 428 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 GOSR2O14653 212 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 PXDC1Q5TGL8 231 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 STX12Q86Y82 276 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 LINC00052Q96N35 136 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 SLC25A39Q9BZJ4 359 aaPredicted RBP18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 LYRM2Q9NU23 88 aaPredicted RBP18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 RNF24Q9Y225 148 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 AGRNO00468 2067 aa18.09■□□□□ 0.49
RAPGEF1-206ENST00000438647 DYNC2H1Q8NCM8 4307 aaKnown RBP18.08■□□□□ 0.49
RAPGEF1-206ENST00000438647 FAM24AA6NFZ4 105 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 H3BRN7 92 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 SOCS3O14543 225 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 CST7O76096 145 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 OR5G3P0C626 314 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 RAB31Q13636 194 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 SHANK2-AS3Q9BTD1 123 aa18.08■□□□□ 0.48
RAPGEF1-206ENST00000438647 HLA-DRB4P13762 266 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 SULT1A1P50225 295 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 RSG1Q9BU20 258 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 SCRT1Q9BWW7 348 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 ARL6Q9H0F7 186 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 HLA-DRB4X5D2U9 266 aa18.07■□□□□ 0.48
RAPGEF1-206ENST00000438647 H3BMM0 161 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 AGPAT2O15120 278 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 RPL7P18124 248 aaKnown RBP18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 S100A11P31949 105 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 HBG1P69891 147 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 HBG2P69892 147 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 FOXI2Q6ZQN5 318 aa18.06■□□□□ 0.48
RAPGEF1-206ENST00000438647 C16orf92Q96LL3 132 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms