RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
CUBN-204ENST00000438254 RNF125Q96EQ8 232 aa7.43□□□□□ -1.22
CUBN-204ENST00000438254 SAT2Q96F10 170 aaPredicted RBP7.43□□□□□ -1.22
CUBN-204ENST00000438254 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
CUBN-204ENST00000438254 CITED2Q99967 270 aaPredicted RBP7.43□□□□□ -1.22
CUBN-204ENST00000438254 C19orf24Q9BVV8 132 aa7.43□□□□□ -1.22
CUBN-204ENST00000438254 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
CUBN-204ENST00000438254 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
CUBN-204ENST00000438254 JMJD1CQ15652 2540 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 TRAV1-1A0A0B4J248 108 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 GGCTO75223 188 aaKnown RBP7.42□□□□□ -1.22
CUBN-204ENST00000438254 SCGB2A1O75556 95 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 HSPB1P04792 205 aaKnown RBP7.42□□□□□ -1.22
CUBN-204ENST00000438254 IL4P05112 153 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 UNQ9165/PRO28630Q6UXU0 137 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 Q6ZRG5 221 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 TMEM190Q8WZ59 177 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 OR5B12Q96R08 314 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 PFDN5Q99471 154 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 DNAJC4Q9NNZ3 241 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 TSSC4Q9Y5U2 329 aaPredicted RBP7.42□□□□□ -1.22
CUBN-204ENST00000438254 U3KQE9 123 aa7.42□□□□□ -1.22
CUBN-204ENST00000438254 FBN1P35555 2871 aaKnown RBP7.42□□□□□ -1.22
CUBN-204ENST00000438254 IGHV3-35A0A0C4DH35 117 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 H3BRN7 92 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 LGALS9O00182 355 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 HYPMO75409 117 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 LYZP61626 148 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 SPATA31B1PQ5VZV4 182 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 FAM122CQ6P4D5 195 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 REC114Q7Z4M0 266 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 C11orf44Q8N8P7 122 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 OR1L4Q8NGR5 311 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 FAM213BQ8TBF2 198 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 PCNPQ8WW12 178 aaKnown RBP7.41□□□□□ -1.22
CUBN-204ENST00000438254 RAB24Q969Q5 203 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 ZNF503Q96F45 646 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 UHRF2Q96PU4 802 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 CITED1Q99966 193 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
CUBN-204ENST00000438254 TECRQ9NZ01 308 aaKnown RBP7.41□□□□□ -1.22
CUBN-204ENST00000438254 FUT9Q9Y231 359 aa7.41□□□□□ -1.22
CUBN-204ENST00000438254 ZNF705EA8MWA4 302 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 A8MWP6 167 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 COX7A2P2O60397 106 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
CUBN-204ENST00000438254 ORM2P19652 201 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 CRYBB3P26998 211 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 CDC34P49427 236 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 RHOBP62745 196 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 BLOC1S1P78537 153 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 DEFB136Q30KP8 78 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 FAM78BQ5VT40 261 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 C10orf113Q5VZT2 155 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 OR1B1Q8NGR6 318 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 SUN5Q8TC36 379 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 RAX2Q96IS3 184 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 RNF2Q99496 336 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 SHANK2-AS3Q9BTD1 123 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 ACTR3CQ9C0K3 210 aaPredicted RBP7.4□□□□□ -1.22
CUBN-204ENST00000438254 SLC25A22Q9H936 323 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 DOK5Q9P104 306 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 HIGD1AQ9Y241 93 aa7.4□□□□□ -1.22
CUBN-204ENST00000438254 TRAV5A0A0B4J249 113 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 LINC01619G3V211 115 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 K7EMT4 169 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 BUB3O43684 328 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 PMS2P11Q13670 270 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 NDUFA11Q86Y39 141 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 OR11H1Q8NG94 326 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 PBDC1Q9BVG4 233 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 SLC25A2Q9BXI2 301 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 MED9Q9NWA0 146 aa7.39□□□□□ -1.23
CUBN-204ENST00000438254 SETD2Q9BYW2 2564 aaPredicted RBP7.39□□□□□ -1.23
CUBN-204ENST00000438254 TENM1Q9UKZ4 2725 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 IGHV3OR16-8A0A075B7F1 116 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 TMEM213A2RRL7 107 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 APOHP02749 345 aaPredicted RBP7.38□□□□□ -1.23
CUBN-204ENST00000438254 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 GP9P14770 177 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 ZP3P21754 424 aa7.38□□□□□ -1.23
CUBN-204ENST00000438254 SLURP1P55000 103 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms