RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
NEDD4-202ENST00000435532 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
NEDD4-202ENST00000435532 PAM16Q9Y3D7 125 aa12.66□□□□□ -0.38
NEDD4-202ENST00000435532 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 VPREB3Q9UKI3 123 aa12.65□□□□□ -0.38
NEDD4-202ENST00000435532 TSSC4Q9Y5U2 329 aaPredicted RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 QRFPP83859 136 aa12.65□□□□□ -0.38
NEDD4-202ENST00000435532 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
NEDD4-202ENST00000435532 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
NEDD4-202ENST00000435532 IGKV2-40A0A087WW87 121 aaPredicted RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 IGKV2D-40P01614 121 aaPredicted RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 SRP19P09132 144 aaKnown RBP12.65□□□□□ -0.38
NEDD4-202ENST00000435532 ANAPC1Q9H1A4 1944 aa12.65□□□□□ -0.38
NEDD4-202ENST00000435532 SLC17A3O00476 420 aa12.65□□□□□ -0.39
NEDD4-202ENST00000435532 NDUFB8O95169 186 aa12.65□□□□□ -0.39
NEDD4-202ENST00000435532 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.39
NEDD4-202ENST00000435532 FANCMQ8IYD8 2048 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RBMY1BA6NDE4 496 aaKnown RBP12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RBMY1EA6NEQ0 496 aaKnown RBP12.64□□□□□ -0.39
NEDD4-202ENST00000435532 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 GHRHP01286 108 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RBMY1DP0C7P1 496 aaKnown RBP12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 ADORA2A-AS1P86434 159 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 FOXL1Q12952 345 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 TCF23Q7RTU1 214 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 BIVMQ86UB2 503 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 DEFB131AP59861 70 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 OSTCQ9NRP0 149 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 H3BUA1 57 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 SDK2Q58EX2 2172 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
NEDD4-202ENST00000435532 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 SELENOKQ9Y6D0 94 aa12.64□□□□□ -0.39
NEDD4-202ENST00000435532 TRAV5A0A0B4J249 113 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 IGHV2-70P01814 119 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 HEATR5BQ9P2D3 2071 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
NEDD4-202ENST00000435532 FXYD7P58549 80 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
NEDD4-202ENST00000435532 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
NEDD4-202ENST00000435532 FHL1Q13642 323 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 FAM186AA6NE01 2351 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 SPATA45Q537H7 98 aa12.63□□□□□ -0.39
NEDD4-202ENST00000435532 DNAL4O96015 105 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 CBLN1P23435 193 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 PKIAP61925 76 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 SMIM12Q96EX1 92 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 ACACAQ13085 2346 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 PSG3Q16557 428 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
NEDD4-202ENST00000435532 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 TMEM249Q2WGJ8 235 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
NEDD4-202ENST00000435532 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 CD28P10747 220 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 MGST2Q99735 147 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 FOXC2Q99958 501 aa12.62□□□□□ -0.39
NEDD4-202ENST00000435532 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 NDUFA4O00483 81 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 DAD1P61803 113 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 C17orf58Q2M2W7 97 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 TMEM14EPQ6UXP3 125 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 YPEL3P61236 119 aaPredicted RBP12.61□□□□□ -0.39
NEDD4-202ENST00000435532 STAG3L3P0CL85 134 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
NEDD4-202ENST00000435532 DEFB112Q30KQ8 113 aa12.61□□□□□ -0.39
NEDD4-202ENST00000435532 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 BTCP35070 178 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 EREGO14944 169 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 HELZP42694 1942 aaKnown RBP12.6□□□□□ -0.39
NEDD4-202ENST00000435532 A0A1W2PPI3 338 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 C1QL4Q86Z23 238 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 LTBP2Q14767 1821 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
NEDD4-202ENST00000435532 SHANK2-AS3Q9BTD1 123 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 PDE6HQ13956 83 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 PPIFP30405 207 aaKnown RBP12.59□□□□□ -0.39
NEDD4-202ENST00000435532 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 TDGF1P3P51864 188 aa12.59□□□□□ -0.39
NEDD4-202ENST00000435532 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms