RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ARF6P62330 175 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
CD44-210ENST00000434472 SHANK2-AS3Q9BTD1 123 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 VAMP8Q9BV40 100 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 NRN1Q9NPD7 142 aa8.27□□□□□ -1.09
CD44-210ENST00000434472 TBL2Q9Y4P3 447 aaKnown RBP8.27□□□□□ -1.09
CD44-210ENST00000434472 A0A1B0GXF2 115 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 NPIPB5A8MRT5 1133 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 K7EQM0 130 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 M0R143 59 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 HBBP68871 147 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
CD44-210ENST00000434472 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 MINOS1Q5TGZ0 78 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 Q86TA4 180 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 FAM103A1Q9BTL3 118 aaKnown RBP8.26□□□□□ -1.09
CD44-210ENST00000434472 GSX1Q9H4S2 264 aaPredicted RBP8.26□□□□□ -1.09
CD44-210ENST00000434472 MINOS1-NBL1R4GNA1 71 aa8.26□□□□□ -1.09
CD44-210ENST00000434472 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
CD44-210ENST00000434472 WI2-2373I1.2A0A1W2PRP0 233 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 M0QZK8 103 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
CD44-210ENST00000434472 RAB4AP20338 218 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 PMCHP20382 165 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 MFAP4P55083 255 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 KRTDAPP60985 99 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 SLAQ13239 276 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 CYB5R2Q6BCY4 276 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 RBPMS2Q6ZRY4 209 aaKnown RBP8.25□□□□□ -1.09
CD44-210ENST00000434472 C18orf32Q8TCD1 76 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 FBXL7Q9UJT9 491 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 HILPDAQ9Y5L2 63 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 ACACAQ13085 2346 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 GVINP1Q7Z2Y8 2422 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 ANKRD11Q6UB99 2663 aaPredicted RBP8.25□□□□□ -1.09
CD44-210ENST00000434472 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 TRBV19A0A075B6N1 114 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 A0A1B0GV90 55 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 DIRC3C9JPN6 131 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 NPIPB6E9PJ23 425 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 S100A7P31151 101 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 HES1Q14469 280 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 DTX2Q86UW9 622 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 TMEM75Q8N9X5 138 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 VN1R17PQ8TDU5 208 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
CD44-210ENST00000434472 THYN1Q9P016 225 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 ZFP30Q9Y2G7 519 aa8.25□□□□□ -1.09
CD44-210ENST00000434472 AKAP13Q12802 2813 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 APC2O95996 2303 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 SERTM2A0A1B0GWG4 89 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 HLA-DRB1P01911 266 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
CD44-210ENST00000434472 CDKN1AP38936 164 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 CAMPP49913 170 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 LDLRAD2Q5SZI1 272 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 LHFPL4Q7Z7J7 247 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 TTC9CQ8N5M4 171 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 IGFBPL1Q8WX77 278 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 ARPC1AQ92747 370 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 RCHY1Q96PM5 261 aa8.24□□□□□ -1.09
CD44-210ENST00000434472 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 H3BTX0 84 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 GNG7O60262 68 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 HSBP1O75506 76 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 IGLC2P0DOY2 106 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 COL8A1P27658 744 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 KLRD1Q13241 179 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 PDE6HQ13956 83 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 EBI3Q14213 229 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 DMRTA1Q5VZB9 504 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 ZNF705AQ6ZN79 300 aaPredicted RBP8.23□□□□□ -1.09
CD44-210ENST00000434472 TCF24Q7RTU0 167 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 PRNTQ86SH4 94 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 NIT1Q86X76 327 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 ARL6IP6Q8N6S5 226 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 SGK494Q96LW2 274 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 LOC400499M0QZD8 3231 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 NAV3Q8IVL0 2385 aa8.23□□□□□ -1.09
CD44-210ENST00000434472 MALRD1Q5VYJ5 2156 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 PKDREJQ9NTG1 2253 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 A0A1B0GW15 77 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 IL4P05112 153 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 CD33P20138 364 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 PMCHL1Q16048 86 aa8.22□□□□□ -1.09
CD44-210ENST00000434472 LINC00322Q6ZN03 302 aaPredicted RBP8.22□□□□□ -1.09
CD44-210ENST00000434472 VMO1Q7Z5L0 202 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms