RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 TFPTP0C1Z6 253 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 CD36P16671 472 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 SULT1A1P50225 295 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 FABP5Q01469 135 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 OR2F1Q13607 317 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 HIST3H3Q16695 136 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 C1orf140Q5VVS0 124 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 RPS27LQ71UM5 84 aaKnown RBP4.34□□□□□ -1.71
PTPRK-212ENST00000434424 LRRC28Q86X40 367 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-212ENST00000434424 OR8B3Q8NGG8 313 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 OR5D16Q8NGK9 328 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 PYURFQ96I23 114 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 OR8B2Q96RD0 313 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 GABARAPL1Q9H0R8 117 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 MED28Q9H204 178 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 KCNIP2Q9NS61 270 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 VPREB3Q9UKI3 123 aa4.34□□□□□ -1.71
PTPRK-212ENST00000434424 HEATR5AQ86XA9 2040 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 FAAHO00519 579 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 KRT75O95678 551 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 GUSBP08236 651 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 HSD11B1P28845 292 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 SERPINB9P50453 376 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 FGF12P61328 243 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 RPL38P63173 70 aaKnown RBP4.33□□□□□ -1.72
PTPRK-212ENST00000434424 HLA-DRB3P79483 266 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 C5orf46Q6UWT4 87 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 OSR2Q8N2R0 312 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 KLF14Q8TD94 323 aaPredicted RBP4.33□□□□□ -1.72
PTPRK-212ENST00000434424 Q8WTZ3 238 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 ABHD14BQ96IU4 210 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 TSPAN32Q96QS1 320 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF586Q9NXT0 402 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 TRAPPC1Q9Y5R8 145 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 VWFP04275 2813 aa4.33□□□□□ -1.72
PTPRK-212ENST00000434424 EXOC1LA0A1B0GW35 172 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF98A6NK75 572 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-212ENST00000434424 TRGV3P03979 118 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 KCNJ8Q15842 424 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 NDUFA11Q86Y39 141 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 IFT20Q8IY31 132 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 C20orf196Q8IYI0 205 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 SLC22A24Q8N4F4 322 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 MUC7Q8TAX7 377 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 ROPN1LQ96C74 230 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 SLC35G5Q96KT7 338 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 OR51I2Q9H344 312 aa4.32□□□□□ -1.72
PTPRK-212ENST00000434424 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-212ENST00000434424 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-212ENST00000434424 IGHV3OR15-7A0A075B7D8 119 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 LCE6AA0A183 80 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 LOC102725191A0A1B0GVB3 256 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 K7EIL1 84 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 DEDDO75618 318 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 IGHV1-69P01742 117 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 DBIP07108 87 aaKnown RBP4.31□□□□□ -1.72
PTPRK-212ENST00000434424 CGB3P0DN86 165 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 CGB7P0DN87 165 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 PRPS1L1P21108 318 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 GUCA1AP43080 201 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-212ENST00000434424 OR1E2P47887 323 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 REG1BP48304 166 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 GDI2P50395 445 aaKnown RBP4.31□□□□□ -1.72
PTPRK-212ENST00000434424 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 HERVK_113P63121 156 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 EBI3Q14213 229 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 BATFQ16520 125 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 LIN52Q52LA3 116 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 NEGR1Q7Z3B1 354 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF283Q8N7M2 679 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 PPP3R2Q96LZ3 170 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 LINC00477Q96M19 166 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF230Q9UIE0 474 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-212ENST00000434424 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
PTPRK-212ENST00000434424 KMT2CQ8NEZ4 4911 aaKnown RBP4.31□□□□□ -1.72
PTPRK-212ENST00000434424 CADP27708 2225 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF729A6NN14 1252 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-212ENST00000434424 A8MWP4 228 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 MRASO14807 208 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 IGKV1D-33P01593 117 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 IGKV1-33P01594 117 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 MAGEA12P43365 314 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 SRP9P49458 86 aaKnown RBP4.3□□□□□ -1.72
PTPRK-212ENST00000434424 RAB5BP61020 215 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 RANP62826 216 aaKnown RBP4.3□□□□□ -1.72
PTPRK-212ENST00000434424 JOSD1Q15040 202 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-212ENST00000434424 SPIN3Q5JUX0 258 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 NIT1Q86X76 327 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 OR52B2Q96RD2 323 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 ZNF286AQ9HBT8 521 aa4.3□□□□□ -1.72
PTPRK-212ENST00000434424 PRKDCP78527 4128 aaKnown RBP4.29□□□□□ -1.72
PTPRK-212ENST00000434424 TRAV36DV7A0A075B6V5 113 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 CLDN24A6NM45 220 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 FSTL3O95633 263 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms