RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ACTR3CQ9C0K3 210 aaPredicted RBP20.28■□□□□ 0.84
TMEM248-205ENST00000433271 SEPSECSQ9HD40 501 aaKnown RBP20.28■□□□□ 0.84
TMEM248-205ENST00000433271 HIGD1AQ9Y241 93 aa20.28■□□□□ 0.84
TMEM248-205ENST00000433271 IGHV3OR16-8A0A075B7F1 116 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 A0A1W2PPV4 95 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 FAM78BQ5VT40 261 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 FAM122CQ6P4D5 195 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 TMEM190Q8WZ59 177 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 CITED1Q99966 193 aa20.27■□□□□ 0.84
TMEM248-205ENST00000433271 SAT2Q96F10 170 aaPredicted RBP20.27■□□□□ 0.83
TMEM248-205ENST00000433271 RAX2Q96IS3 184 aa20.27■□□□□ 0.83
TMEM248-205ENST00000433271 UHRF2Q96PU4 802 aa20.27■□□□□ 0.83
TMEM248-205ENST00000433271 C20orf24Q9BUV8 137 aa20.27■□□□□ 0.83
TMEM248-205ENST00000433271 RABAC1Q9UI14 185 aa20.27■□□□□ 0.83
TMEM248-205ENST00000433271 ZNF320A2RRD8 509 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 NSUN5P1Q3KNT7 163 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 LINC00305Q7Z4B0 112 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 S100A7AQ86SG5 101 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 LURAP1LQ8IV03 231 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 FUT9Q9Y231 359 aa20.26■□□□□ 0.83
TMEM248-205ENST00000433271 CCL24O00175 119 aa20.25■□□□□ 0.83
TMEM248-205ENST00000433271 CDC34P49427 236 aaPredicted RBP20.25■□□□□ 0.83
TMEM248-205ENST00000433271 KLF5Q13887 457 aaPredicted RBP20.25■□□□□ 0.83
TMEM248-205ENST00000433271 ZNF726P1Q15940 193 aa20.25■□□□□ 0.83
TMEM248-205ENST00000433271 DUX3Q96PT4 197 aa20.25■□□□□ 0.83
TMEM248-205ENST00000433271 MRPL32Q9BYC8 188 aaKnown RBP20.25■□□□□ 0.83
TMEM248-205ENST00000433271 BLOC1S1P78537 153 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 FHL3Q13643 280 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 RAB24Q969Q5 203 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 METTL26Q96S19 204 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 SLC25A39Q9BZJ4 359 aaPredicted RBP20.24■□□□□ 0.83
TMEM248-205ENST00000433271 SLC25A22Q9H936 323 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 CTXND1A0A1B0GTU2 59 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 LGALS9O00182 355 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 S100A7P31151 101 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 RAB14P61106 215 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 SPATA31B1PQ5VZV4 182 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 MIR17HGQ75NE6 70 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 REC114Q7Z4M0 266 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 C1QL4Q86Z23 238 aa20.24■□□□□ 0.83
TMEM248-205ENST00000433271 K7EMT4 169 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 H2AFB1P0C5Y9 115 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 NPPCP23582 126 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 SLURP1P55000 103 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 SYNJ2BPP57105 145 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 SSX7Q7RTT5 188 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 SHANK2-AS3Q9BTD1 123 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 UFC1Q9Y3C8 167 aa20.23■□□□□ 0.83
TMEM248-205ENST00000433271 NMBP08949 121 aa20.22■□□□□ 0.83
TMEM248-205ENST00000433271 CRYBB3P26998 211 aa20.22■□□□□ 0.83
TMEM248-205ENST00000433271 MORN5Q5VZ52 161 aa20.22■□□□□ 0.83
TMEM248-205ENST00000433271 MBD3L1Q8WWY6 194 aa20.22■□□□□ 0.83
TMEM248-205ENST00000433271 DAZ1Q9NQZ3 744 aaKnown RBP20.22■□□□□ 0.83
TMEM248-205ENST00000433271 PFDN2Q9UHV9 154 aa20.22■□□□□ 0.83
TMEM248-205ENST00000433271 H3BRN7 92 aa20.21■□□□□ 0.83
TMEM248-205ENST00000433271 ZNF207O43670 478 aaKnown RBP20.21■□□□□ 0.83
TMEM248-205ENST00000433271 SFT2D1Q8WV19 159 aa20.21■□□□□ 0.83
TMEM248-205ENST00000433271 PCNPQ8WW12 178 aaKnown RBP20.2■□□□□ 0.82
TMEM248-205ENST00000433271 ZNF747Q9BV97 191 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 TECRQ9NZ01 308 aaKnown RBP20.2■□□□□ 0.82
TMEM248-205ENST00000433271 ZNF98A6NK75 572 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 A8MWP6 167 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 HMGB3O15347 200 aaKnown RBP20.2■□□□□ 0.82
TMEM248-205ENST00000433271 EIF3GO75821 320 aaKnown RBP eCLIP20.2■□□□□ 0.82
TMEM248-205ENST00000433271 C8orf88P0DMB2 117 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 TAS2R45P59539 299 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 TM4SF20Q53R12 229 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 LCN15Q6UWW0 184 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 SCRT1Q9BWW7 348 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 RNF24Q9Y225 148 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 U3KQE9 123 aa20.2■□□□□ 0.82
TMEM248-205ENST00000433271 TRAV5A0A0B4J249 113 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 MAP1LC3B2A6NCE7 125 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 STAG3L2P0CL84 134 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 STAG3L3P0CL85 134 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 MYCNOSP40205 109 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 CLLU1Q5K131 121 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 MAP1LC3BQ9GZQ8 125 aa20.19■□□□□ 0.82
TMEM248-205ENST00000433271 COL6A5A8TX70 2615 aa20.18■□□□□ 0.82
TMEM248-205ENST00000433271 TRAV1-1A0A0B4J248 108 aa20.18■□□□□ 0.82
TMEM248-205ENST00000433271 LEMD1Q68G75 181 aa20.18■□□□□ 0.82
TMEM248-205ENST00000433271 DLX4Q92988 240 aaPredicted RBP20.18■□□□□ 0.82
TMEM248-205ENST00000433271 FAM167A-AS1Q96KT0 104 aa20.18■□□□□ 0.82
TMEM248-205ENST00000433271 SLC25A2Q9BXI2 301 aa20.18■□□□□ 0.82
TMEM248-205ENST00000433271 BUB3O43684 328 aa20.17■□□□□ 0.82
TMEM248-205ENST00000433271 KHDC3LQ587J8 217 aa20.17■□□□□ 0.82
TMEM248-205ENST00000433271 LYPD6BQ8NI32 183 aa20.17■□□□□ 0.82
TMEM248-205ENST00000433271 NARS2Q96I59 477 aaKnown RBP20.17■□□□□ 0.82
TMEM248-205ENST00000433271 TMEM213A2RRL7 107 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 APOHP02749 345 aaPredicted RBP20.16■□□□□ 0.82
TMEM248-205ENST00000433271 C12orf54Q6X4T0 127 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 IGHV7-4-1A0A0J9YVY3 117 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 TEX46H3BTG2 121 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 CXorf1O96002 111 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 FGF8P55075 233 aaPredicted RBP20.16■□□□□ 0.82
TMEM248-205ENST00000433271 C1orf194Q5T5A4 169 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 C3orf56Q8N813 242 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 STXBP6Q8NFX7 210 aa20.16■□□□□ 0.82
TMEM248-205ENST00000433271 IGHV3-49A0A0A0MS15 119 aa20.15■□□□□ 0.82
TMEM248-205ENST00000433271 A0A1W2PS18 150 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms