RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 DYNLRB2Q8TF09 96 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 GLMPQ8WWB7 406 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 AQP10Q96PS8 301 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 METTL26Q96S19 204 aa9.31□□□□□ -0.92
USP40-205ENST00000430158 ZMAT5Q9UDW3 170 aaKnown RBP9.31□□□□□ -0.92
USP40-205ENST00000430158 AGRNO00468 2067 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 IGHV3-66A0A0C4DH42 116 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 RNF222A6NCQ9 220 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 EIF2B2P49770 351 aaKnown RBP9.3□□□□□ -0.92
USP40-205ENST00000430158 FGL1Q08830 312 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 ST6GAL2Q96JF0 529 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 NEURL2Q9BR09 285 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 C19orf73Q9NVV2 129 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 TNFSF18Q9UNG2 199 aa9.3□□□□□ -0.92
USP40-205ENST00000430158 DNAH9Q9NYC9 4486 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 UBE2L5PA0A1B0GUS4 154 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 DFFBO76075 338 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 LYZP61626 148 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 CLINT1Q14677 625 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 OPCMLQ14982 345 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 BPIFCQ8NFQ6 507 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 C17orf77Q96MU5 243 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 RABAC1Q9UI14 185 aa9.29□□□□□ -0.92
USP40-205ENST00000430158 A0A1B0GVG6 124 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 A0A1W2PS18 150 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 MPDU1O75352 247 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 RPL29P47914 159 aaKnown RBP9.28□□□□□ -0.92
USP40-205ENST00000430158 CAMLGP49069 296 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 TCF24Q7RTU0 167 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 ZNF546Q86UE3 836 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 TMEM37Q8WXS4 190 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 ATP5SQ99766 215 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
USP40-205ENST00000430158 PBDC1Q9BVG4 233 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 PARD6GQ9BYG4 376 aaPredicted RBP9.28□□□□□ -0.92
USP40-205ENST00000430158 WDR61Q9GZS3 305 aaKnown RBP9.28□□□□□ -0.92
USP40-205ENST00000430158 TENM3Q9P273 2699 aa9.28□□□□□ -0.92
USP40-205ENST00000430158 NBEAL2Q6ZNJ1 2754 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 H3BRN7 92 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 CD5P06127 495 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 CD7P09564 240 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 FGF7P21781 194 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 SMIM3Q9BZL3 60 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 FBXL17Q9UF56 701 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 COL7A1Q02388 2944 aa9.27□□□□□ -0.93
USP40-205ENST00000430158 FXYD6-FXYD2A0A087WZ82 144 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 TRAV2A0A0B4J234 112 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 HYPMO75409 117 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 ORM2P19652 201 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 BMI1P35226 326 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 GUCA2BQ16661 112 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 PXDC1Q5TGL8 231 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 LAMTOR1Q6IAA8 161 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 RBPMS2Q6ZRY4 209 aaKnown RBP9.26□□□□□ -0.93
USP40-205ENST00000430158 OR1B1Q8NGR6 318 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 SLC25A39Q9BZJ4 359 aaPredicted RBP9.26□□□□□ -0.93
USP40-205ENST00000430158 MS4A6AQ9H2W1 248 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 TMEM231Q9H6L2 316 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 SLC39A9Q9NUM3 307 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 DOK5Q9P104 306 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 RFNGQ9Y644 331 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
USP40-205ENST00000430158 A8MZ25 164 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 K7EQG2 157 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 MRPS12O15235 138 aaKnown RBP9.25□□□□□ -0.93
USP40-205ENST00000430158 RAB31Q13636 194 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 MORN5Q5VZ52 161 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 TCTE3Q8IZS6 198 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 FAM24BQ8N5W8 94 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 SCRT1Q9BWW7 348 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 ARL6Q9H0F7 186 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 HIGD1AQ9Y241 93 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
USP40-205ENST00000430158 HMSDA8MTL9 139 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 SOCS3O14543 225 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
USP40-205ENST00000430158 B2MP61769 119 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 GCSAMLQ5JQS6 135 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 LEMD1Q68G75 181 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 SIGLEC15Q6ZMC9 328 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 LINC00322Q6ZN03 302 aaPredicted RBP9.24□□□□□ -0.93
USP40-205ENST00000430158 GBGT1Q8N5D6 347 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 GRAMD2BQ96HH9 432 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 NARS2Q96I59 477 aaKnown RBP9.24□□□□□ -0.93
USP40-205ENST00000430158 CITED4Q96RK1 184 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
USP40-205ENST00000430158 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms