RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CT45A7P0DMV0 189 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 SSBP2P81877 361 aaPredicted RBP6.56□□□□□ -1.36
HPS4-205ENST00000429411 MBNL2Q5VZF2 373 aaKnown RBP6.56□□□□□ -1.36
HPS4-205ENST00000429411 Q6ZWC4 215 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 TCF24Q7RTU0 167 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 CENPVQ7Z7K6 275 aaPredicted RBP6.56□□□□□ -1.36
HPS4-205ENST00000429411 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 PGLYRP4Q96LB8 373 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 ITPR3Q14573 2671 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 IGHV3-35A0A0C4DH35 117 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 MUC21A0A0G2JKD1 596 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 MUC21A0A140T8X8 626 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 GGTLC3B5MD39 225 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 IGHG3P01860 377 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 P0C879 139 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 PAFAH1B2P68402 229 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 C22orf34Q6ZV56 151 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 ZNF843Q8N446 348 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 TNFRSF19Q9NS68 423 aa6.56□□□□□ -1.36
HPS4-205ENST00000429411 PTPRBP23467 1997 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 FAM90A27PA6NNH2 459 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 RPL15P61313 204 aaKnown RBP6.55□□□□□ -1.36
HPS4-205ENST00000429411 PRCDQ00LT1 54 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 BSPH1Q075Z2 132 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 KLRB1Q12918 225 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 CT83Q5H943 113 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 LYPD2Q6UXB3 125 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 MCRIP2Q9BUT9 160 aaKnown RBP6.55□□□□□ -1.36
HPS4-205ENST00000429411 PRORYQ9H606 182 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 DKK4Q9UBT3 224 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 UBR5O95071 2799 aaPredicted RBP6.55□□□□□ -1.36
HPS4-205ENST00000429411 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
HPS4-205ENST00000429411 IGKV1OR2-108A0A075B7D4 117 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 IGHV3OR16-8A0A075B7F1 116 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 MMDQ15546 238 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 PRNTQ86SH4 94 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 FAM168AQ92567 244 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 NEUROG1Q92886 237 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 RCHY1Q96PM5 261 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 GAFA1Q96PS6 74 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 RPUSD1Q9UJJ7 312 aaKnown RBP6.55□□□□□ -1.36
HPS4-205ENST00000429411 HILPDAQ9Y5L2 63 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 ISLRO14498 428 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 CD99P14209 185 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 CD69Q07108 199 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 OR1L4Q8NGR5 311 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 FAM110AQ9BQ89 295 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 PMCHL2Q9BQD1 86 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 TPSG1Q9NRR2 321 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 INSIG2Q9Y5U4 225 aa6.55□□□□□ -1.36
HPS4-205ENST00000429411 TEX15Q9BXT5 2789 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 C11orf42Q8N5U0 333 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 OR52E5Q8NH55 327 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 RNASEH2CQ8TDP1 164 aaKnown RBP6.54□□□□□ -1.36
HPS4-205ENST00000429411 RPEQ96AT9 228 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 FBXL7Q9UJT9 491 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 FOXA2Q9Y261 457 aaPredicted RBP6.54□□□□□ -1.36
HPS4-205ENST00000429411 UNC79Q9P2D8 2635 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 HIGD1CA8MV81 97 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 J3QKU1 62 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 CORTO00230 105 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 F2RL2O00254 374 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 P01737 135 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 AMY1AP04745 511 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 VWC2Q2TAL6 325 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 C1orf194Q5T5A4 169 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 OR4C13Q8NGP0 309 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 SLC25A33Q9BSK2 321 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 SELENOKQ9Y6D0 94 aa6.54□□□□□ -1.36
HPS4-205ENST00000429411 KMT2BQ9UMN6 2715 aaPredicted RBP6.54□□□□□ -1.36
HPS4-205ENST00000429411 DPRXA6NFQ7 191 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 SH2D7A6NKC9 451 aaPredicted RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 E7EUB6 86 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 TYMSP04818 313 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 C5orf64Q2M2E5 130 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 VSTM2AQ8TAG5 236 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 DUX5Q96PT3 197 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 FBXL15Q9H469 300 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 PEX7O00628 323 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 LY6HO94772 140 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 IGLV1-44P01699 117 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 WNT2P09544 360 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 RNASE2P10153 161 aaKnown RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 RPL27AP46776 148 aaKnown RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 SEC61GP60059 68 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 TMEM200BQ69YZ2 307 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 SP5Q6BEB4 398 aaPredicted RBP6.53□□□□□ -1.36
HPS4-205ENST00000429411 ZNF562Q6V9R5 426 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 PPBPP02775 128 aa6.53□□□□□ -1.36
HPS4-205ENST00000429411 NBEAP1P0C6P0 100 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms