RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 OR8I2Q8N0Y5 310 aa12.27□□□□□ -0.45
TRIM39-209ENST00000428728 WRBO00258 174 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 HOXB5P09067 269 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 SLC25A6P12236 298 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 C1orf194Q5T5A4 169 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
TRIM39-209ENST00000428728 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-209ENST00000428728 F6UB75 175 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 H3BP45 60 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 SYNGR2O43760 224 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 SFT2D2O95562 160 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF705DP0CH99 300 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF705BP0CI00 300 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-209ENST00000428728 S100A5P33763 92 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF709Q8N972 641 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 CIB3Q96Q77 187 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-209ENST00000428728 SLC25A21Q9BQT8 299 aaPredicted RBP12.25□□□□□ -0.45
TRIM39-209ENST00000428728 SLC25A32Q9H2D1 315 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 TMED3Q9Y3Q3 217 aa12.25□□□□□ -0.45
TRIM39-209ENST00000428728 PRSS46E5RG02 174 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 ISLRO14498 428 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 SPANXN5Q5MJ07 72 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 GGNBP1Q5YKI7 109 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 C16orf92Q96LL3 132 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 NEU1Q99519 415 aa12.24□□□□□ -0.45
TRIM39-209ENST00000428728 VPS13DQ5THJ4 4388 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 GATA2P23769 480 aaPredicted RBP12.23□□□□□ -0.45
TRIM39-209ENST00000428728 GALR1P47211 349 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 RPP30P78346 268 aaKnown RBP12.23□□□□□ -0.45
TRIM39-209ENST00000428728 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 EBLN2Q6P2I7 272 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 C20orf173Q96LM9 149 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 NDUFAF3Q9BU61 184 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
TRIM39-209ENST00000428728 DNAH6Q9C0G6 4158 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 A0A0J9YX75 114 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 TMEM189A5PLL7 270 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 SPART-AS1P0CW21 52 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 ORM2P19652 201 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 MEOX2P50222 304 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 PSG9Q00887 426 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 C7orf50Q9BRJ6 194 aaKnown RBP12.22□□□□□ -0.45
TRIM39-209ENST00000428728 RPRMQ9NS64 109 aa12.22□□□□□ -0.45
TRIM39-209ENST00000428728 DNAH10Q8IVF4 4471 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 SMCO3A2RU48 225 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 SMIM9A6NGZ8 99 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 ZNF98A6NK75 572 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 ADAP1O75689 374 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 CFDP00746 253 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-209ENST00000428728 PAX9P55771 341 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 SAMD13Q5VXD3 122 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 SPATA31B1PQ5VZV4 182 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 TMEM182Q6ZP80 229 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-209ENST00000428728 CCDC190Q86UF4 302 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 OR1B1Q8NGR6 318 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 RSG1Q9BU20 258 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 DOK5Q9P104 306 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
TRIM39-209ENST00000428728 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.45
TRIM39-209ENST00000428728 P0DMU3 169 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 FAM222AQ5U5X8 452 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 C1orf158Q8N1D5 194 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 SLC45A2Q9UMX9 530 aa12.2□□□□□ -0.46
TRIM39-209ENST00000428728 NACAE9PAV3 2078 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 HBE1P02100 147 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 HTN3P15516 51 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 INPP1P49441 399 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 POLR2GP62487 172 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRIM39-209ENST00000428728 SPANXN2Q5MJ10 180 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 POM121L12Q8N7R1 296 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 PLA2G2EQ9NZK7 142 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 DKK2Q9UBU2 259 aa12.19□□□□□ -0.46
TRIM39-209ENST00000428728 TEX48A0A1B0GUV7 120 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 C9orf170A2RU37 121 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 SSSCA1O60232 199 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
TRIM39-209ENST00000428728 FGL1Q08830 312 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 IGFL4Q6B9Z1 124 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 C17orf77Q96MU5 243 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
TRIM39-209ENST00000428728 YTHDF2Q9Y5A9 579 aaKnown RBP12.18□□□□□ -0.46
TRIM39-209ENST00000428728 LINC00854A0A1B0GVQ3 168 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms