RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TMEM147Q9BVK8 224 aa18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 UBQLN2Q9UHD9 624 aa18.74■□□□□ 0.59
HERPUD2-205ENST00000427455 LINC00869P0C866 280 aa18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 EWSR1Q01844 656 aaKnown RBP eCLIP18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 FCN2Q15485 313 aa18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 VWC2Q2TAL6 325 aa18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 ZNF546Q86UE3 836 aa18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 PPP1R14BQ96C90 147 aa18.73■□□□□ 0.59
HERPUD2-205ENST00000427455 ORM2P19652 201 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 CMC4P56277 68 aaPredicted RBP18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 BAXQ07812 192 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 ATP6V1FQ16864 119 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 C1orf194Q5T5A4 169 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 SIGLEC15Q6ZMC9 328 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 WFDC3Q8IUB2 231 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 STPG3Q8N7X2 389 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 OR11H7Q8NGC8 314 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 OR1B1Q8NGR6 318 aa18.72■□□□□ 0.59
HERPUD2-205ENST00000427455 AGPAT2O15120 278 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 S100A7P31151 101 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 MGST2Q99735 147 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 RNF126Q9BV68 326 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 FBXL17Q9UF56 701 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 WDR83OSQ9Y284 106 aa18.71■□□□□ 0.59
HERPUD2-205ENST00000427455 UBE2L5PA0A1B0GUS4 154 aa18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 PLP1P60201 277 aa18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 RAB31Q13636 194 aa18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 LINC00322Q6ZN03 302 aaPredicted RBP18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 DCANP1Q8TF63 244 aa18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 MAP6D1Q9H9H5 199 aa18.7■□□□□ 0.58
HERPUD2-205ENST00000427455 RBMY1BA6NDE4 496 aaKnown RBP18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 RBMY1EA6NEQ0 496 aaKnown RBP18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 K7EQG2 157 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 RBMY1DP0C7P1 496 aaKnown RBP18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 NHLH2Q02577 135 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 OR5C1Q8NGR4 320 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 CITED4Q96RK1 184 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 NRN1Q9NPD7 142 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 DOK5Q9P104 306 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 MBD2Q9UBB5 411 aa18.69■□□□□ 0.58
HERPUD2-205ENST00000427455 HUWE1Q7Z6Z7 4374 aaKnown RBP18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 HYPMO75409 117 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 CAMLGP49069 296 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 RAP2BP61225 183 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 HAGHQ16775 308 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 ASB13Q8WXK3 278 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 HIGD1AQ9Y241 93 aa18.68■□□□□ 0.58
HERPUD2-205ENST00000427455 PXDC1Q5TGL8 231 aa18.67■□□□□ 0.58
HERPUD2-205ENST00000427455 S100A7AQ86SG5 101 aa18.67■□□□□ 0.58
HERPUD2-205ENST00000427455 OR8I2Q8N0Y5 310 aa18.67■□□□□ 0.58
HERPUD2-205ENST00000427455 FAM24BQ8N5W8 94 aa18.67■□□□□ 0.58
HERPUD2-205ENST00000427455 ARL6Q9H0F7 186 aa18.67■□□□□ 0.58
HERPUD2-205ENST00000427455 ZNF98A6NK75 572 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 H3BRN7 92 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 LYL1P12980 280 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 APRG1Q8IVJ8 170 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 TM2D3Q9BRN9 247 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 GGTLC1Q9BX51 225 aa18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 SLC25A39Q9BZJ4 359 aaPredicted RBP18.66■□□□□ 0.58
HERPUD2-205ENST00000427455 LOC102724200A0A096LPH7 203 aaPredicted RBP18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 GIPP09681 153 aaPredicted RBP18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 OR5G3P0C626 314 aa18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 THAP6Q8TBB0 222 aa18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 SHANK2-AS3Q9BTD1 123 aa18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 ZMAT4Q9H898 229 aa18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 SLC25A22Q9H936 323 aa18.65■□□□□ 0.58
HERPUD2-205ENST00000427455 MPDU1O75352 247 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 FGF7P21781 194 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 RPL12P30050 165 aaKnown RBP18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 DEFB131AP59861 70 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 CLINT1Q14677 625 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 GPR82Q96P67 336 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 SCRT1Q9BWW7 348 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 SLC25A32Q9H2D1 315 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 HSPB11Q9Y547 144 aa18.64■□□□□ 0.57
HERPUD2-205ENST00000427455 ZNF688P0C7X2 276 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 GALR1P47211 349 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 OPCMLQ14982 345 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 CHAC2Q8WUX2 184 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 ARV1Q9H2C2 271 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 SEPSECSQ9HD40 501 aaKnown RBP18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 U3KQK5 164 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 STAB2Q8WWQ8 2551 aa18.63■□□□□ 0.57
HERPUD2-205ENST00000427455 RPL29P47914 159 aaKnown RBP18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PRR20EP86478 221 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PRR20CP86479 221 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PRR20DP86480 221 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PRR20BP86481 221 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PRR20AP86496 221 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 FGL1Q08830 312 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 ZNF124Q15973 351 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 MIC13Q5XKP0 118 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 PATE2Q6UY27 113 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 UHRF2Q96PU4 802 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 SPATA25Q9BR10 227 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 RNF24Q9Y225 148 aa18.62■□□□□ 0.57
HERPUD2-205ENST00000427455 COX7A2P2O60397 106 aa18.61■□□□□ 0.57
HERPUD2-205ENST00000427455 SNRPD3P62318 126 aaKnown RBP18.61■□□□□ 0.57
HERPUD2-205ENST00000427455 LEMD1Q68G75 181 aa18.61■□□□□ 0.57
HERPUD2-205ENST00000427455 Q6ZRG5 221 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms