RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 P2RY1P47900 373 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 CTAG1AP78358 180 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 FGL1Q08830 312 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 HES1Q14469 280 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF345Q14585 488 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 FXYD3Q14802 87 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 VWC2Q2TAL6 325 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 C2orf83Q53S99 150 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 TMEM252Q8N6L7 170 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 OR1P1Q8NH06 330 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 OR4A16Q8NH70 328 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 DTD1Q8TEA8 209 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 ARPC1AQ92747 370 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 RNF125Q96EQ8 232 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 CIB3Q96Q77 187 aaPredicted RBP4.14□□□□□ -1.75
C9orf3-205ENST00000427193 CITED1Q99966 193 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 COMMD5Q9GZQ3 224 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 MAGT1Q9H0U3 335 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 GSKIPQ9P0R6 139 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 MBD2Q9UBB5 411 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 F11RQ9Y624 299 aaKnown RBP4.14□□□□□ -1.75
C9orf3-205ENST00000427193 U3KQ87 197 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
C9orf3-205ENST00000427193 A0A1W2PN81 502 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 IGSF23A1L1A6 192 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 FNDC10F2Z333 226 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 G3V318 75 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 I3L2K1 104 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 K7EIM0 57 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 MED6O75586 246 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 OR13C7P0DN81 318 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
C9orf3-205ENST00000427193 CXCL2P19875 107 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 PSMB8P28062 276 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 CHRNA7P36544 502 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 HTR2BP41595 481 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 TNXAQ16473 311 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 LGALSLQ3ZCW2 172 aaPredicted RBP4.13□□□□□ -1.75
C9orf3-205ENST00000427193 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 C9orf62Q8N4C0 152 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 LINC00469Q8N7U9 141 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 LFNGQ8NES3 379 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 LINC01006Q8NI28 216 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 MRAPQ8TCY5 172 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 BSCL2Q96G97 398 aaPredicted RBP4.13□□□□□ -1.75
C9orf3-205ENST00000427193 HYLS1Q96M11 299 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 CLCC1Q96S66 551 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 RASL11BQ9BPW5 248 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 FAM103A1Q9BTL3 118 aaKnown RBP4.13□□□□□ -1.75
C9orf3-205ENST00000427193 FNDC4Q9H6D8 234 aaPredicted RBP4.13□□□□□ -1.75
C9orf3-205ENST00000427193 CYTL1Q9NRR1 136 aa4.13□□□□□ -1.75
C9orf3-205ENST00000427193 IGKV1OR2-108A0A075B7D4 117 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 TRAV41A0A0B4J266 112 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 ZNF320A2RRD8 509 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 BTBD17A6NE02 478 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 FAM24AA6NFZ4 105 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 G3V4G9 280 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 H3BUA1 57 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SSSCA1O60232 199 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SCGB1D1O95968 90 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 IFNA17P01571 189 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 PET100P0DJ07 73 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SULT1A1P50225 295 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 BAXQ07812 192 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SPINK9Q5DT21 86 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 C19orf35Q6ZS72 473 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 ACOT7LQ6ZUV0 252 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SLC35E3Q7Z769 313 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 KCNRGQ8N5I3 272 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 TMEM116Q8NCL8 245 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 RNASE11Q8TAA1 199 aaKnown RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 RNASEH2CQ8TDP1 164 aaKnown RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 NOL4LQ96MY1 436 aaPredicted RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 TXN2Q99757 166 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 CITED2Q99967 270 aaPredicted RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 SPXQ9BT56 116 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 PDCD10Q9BUL8 212 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 GGACTQ9BVM4 153 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 PARD6GQ9BYG4 376 aaPredicted RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 PLEKHA3Q9HB20 300 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 WFDC1Q9HC57 220 aa4.12□□□□□ -1.75
C9orf3-205ENST00000427193 MRPL36Q9P0J6 103 aaKnown RBP4.12□□□□□ -1.75
C9orf3-205ENST00000427193 CEBPZOSA8MTT3 80 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 C3orf84H3BNL1 204 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 WRBO00258 174 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 CNIH1O95406 144 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 RLN2P04090 185 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 IAPPP10997 89 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 NPY1RP25929 384 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 RPL12P30050 165 aaKnown RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 GPX4P36969 197 aaPredicted RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 ERHP84090 104 aaKnown RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 EWSR1Q01844 656 aaKnown RBP eCLIP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 TMEM267Q0VDI3 215 aaPredicted RBP4.11□□□□□ -1.75
C9orf3-205ENST00000427193 OR2F1Q13607 317 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 PLGLAQ15195 96 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 LRRC37A5PQ49AS3 106 aa4.11□□□□□ -1.75
C9orf3-205ENST00000427193 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms