RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SCP2D1Q9UJQ7 156 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 PAIP2BQ9ULR5 123 aaKnown RBP8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 RABL2BQ9UNT1 228 aa8.72□□□□□ -1.01
HLA-DQB3-203ENST00000425319 F5H768 121 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RGS5O15539 181 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 NUDT3O95989 172 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ATP5G1P05496 136 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 AKAIN1P0CW23 69 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ATP5G3P48201 142 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SMCO1Q147U7 214 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 GDF5OSQ5U4N7 250 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF575Q86XF7 245 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR1S1Q8NH92 325 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SLC35B3Q9H1N7 401 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TMEM56-RWDD3S4R434 201 aa8.71□□□□□ -1.02
HLA-DQB3-203ENST00000425319 FRAS1Q86XX4 4008 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 A0A0J9YX75 114 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 MED6O75586 246 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ADAP1O75689 374 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 NXPH3O95157 252 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 INSP01308 110 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DEFB130BP0DP73 79 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DEFB130AP0DP74 79 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 NCS1P62166 190 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF79Q15937 498 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR4C16Q8NGL9 310 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 LRRC20Q8TCA0 184 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 FUNDC2Q9BWH2 189 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 GPR132Q9UNW8 380 aa8.7□□□□□ -1.02
HLA-DQB3-203ENST00000425319 A0A0B4J2A0 478 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CBY3A6NI87 242 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 GAMTQ14353 236 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TTC32Q5I0X7 151 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 C1orf158Q8N1D5 194 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 BPIFCQ8NFQ6 507 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR4D5Q8NGN0 318 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CIB3Q96Q77 187 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TRGV9Q99603 122 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RSG1Q9BU20 258 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 WDR12Q9GZL7 423 aaKnown RBP8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SLC25A22Q9H936 323 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SHPKQ9UHJ6 478 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SLC45A2Q9UMX9 530 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TSPOP30536 169 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RHOBP62745 196 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF90Q03938 601 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 FGL1Q08830 312 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR2F1Q13607 317 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF709Q8N972 641 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR4D10Q8NGI6 311 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 LINC01587Q99440 93 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RBKSQ9H477 322 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RAP2BP61225 183 aa8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CCDC28AQ8IWP9 274 aa8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR10J6PQ8NGY7 276 aa8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 LHFPL5Q8TAF8 219 aa8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 PTTG2Q9NZH5 202 aa8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TIMM8BQ9Y5J9 83 aaPredicted RBP8.67□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF705GA8MUZ8 300 aaPredicted RBP8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 F6UB75 175 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ORM2P19652 201 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DEFB1P60022 68 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TNP2Q05952 138 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 IL18Q14116 193 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 Q9H8V8 135 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 MCUBQ9NWR8 336 aa8.66□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DNAH10Q8IVF4 4471 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DUXBA0A1W2PPF3 345 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SOCS3O14543 225 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 EREGO14944 169 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 HTN1P15515 57 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 CNN1P51911 297 aaKnown RBP8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 SPINK13Q1W4C9 94 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TMEM144Q7Z5S9 345 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 OR51S1Q8NGJ8 323 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 TMEM170AQ8WVE7 144 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 C16orf74Q96GX8 76 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 RSL24D1Q9UHA3 163 aaKnown RBP8.65□□□□□ -1.02
HLA-DQB3-203ENST00000425319 AGRNO00468 2067 aa8.65□□□□□ -1.03
HLA-DQB3-203ENST00000425319 BTF3P20290 206 aaKnown RBP8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 TAS2R60P59551 318 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 AKR1C1Q04828 323 aa8.64□□□□□ -1.03
HLA-DQB3-203ENST00000425319 OR5I1Q13606 314 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms