RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 Q6ZRG5 221 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 OR10G4Q8NGN3 311 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 OR10G9Q8NGN4 311 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 OR10G7Q8NGN6 311 aa10.26□□□□□ -0.77
PRPF39-202ENST00000424478 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
PRPF39-202ENST00000424478 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
PRPF39-202ENST00000424478 GNPNAT1Q96EK6 184 aaPredicted RBP10.25□□□□□ -0.77
PRPF39-202ENST00000424478 SCAF4O95104 1147 aaKnown RBP10.25□□□□□ -0.77
PRPF39-202ENST00000424478 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
PRPF39-202ENST00000424478 LCN15Q6UWW0 184 aa10.25□□□□□ -0.77
PRPF39-202ENST00000424478 WI2-2373I1.2A0A1W2PRP0 233 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 C4BPBP20851 252 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 HYPMO75409 117 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 RELQ04864 619 aaPredicted RBP10.24□□□□□ -0.77
PRPF39-202ENST00000424478 C10orf113Q5VZT2 155 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 IQCF2Q8IXL9 164 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
PRPF39-202ENST00000424478 OR10J4P0C629 311 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 NDUFA11Q86Y39 141 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 TMEM190Q8WZ59 177 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 PSMG3Q9BT73 122 aaPredicted RBP10.24□□□□□ -0.77
PRPF39-202ENST00000424478 TMPRSS5Q9H3S3 457 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 DNAJC4Q9NNZ3 241 aa10.24□□□□□ -0.77
PRPF39-202ENST00000424478 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 PF4P02776 101 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 SEC11BP0C7V7 166 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 PYYP10082 97 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 SELENOTP62341 195 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 FAM209BQ5JX69 171 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 ADAMTSL5Q6ZMM2 481 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-202ENST00000424478 GAR1Q9NY12 217 aaKnown RBP10.23□□□□□ -0.77
PRPF39-202ENST00000424478 CMYA5Q8N3K9 4069 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 TMEM213A2RRL7 107 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 ZNF705EA8MWA4 302 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-202ENST00000424478 M6PRP20645 277 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 KLF5Q13887 457 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-202ENST00000424478 HIGD1AQ9Y241 93 aa10.23□□□□□ -0.77
PRPF39-202ENST00000424478 NDUFA4O00483 81 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 FAM106AQ4KMX7 169 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 TIMM9Q9Y5J7 89 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
PRPF39-202ENST00000424478 FHL3Q13643 280 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 MRPL27Q9P0M9 148 aaKnown RBP10.22□□□□□ -0.77
PRPF39-202ENST00000424478 RABAC1Q9UI14 185 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 NBEAL1Q6ZS30 2694 aa10.22□□□□□ -0.77
PRPF39-202ENST00000424478 ACOT6Q3I5F7 207 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-202ENST00000424478 CCL20P78556 96 aa10.21□□□□□ -0.77
PRPF39-202ENST00000424478 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
PRPF39-202ENST00000424478 SFT2D1Q8WV19 159 aa10.21□□□□□ -0.77
PRPF39-202ENST00000424478 C17orf77Q96MU5 243 aa10.21□□□□□ -0.77
PRPF39-202ENST00000424478 A0A1W2PPV4 95 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 ZP3P21754 424 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 CDC34P49427 236 aaPredicted RBP10.21□□□□□ -0.78
PRPF39-202ENST00000424478 SERF2P84101 59 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 RNF2Q99496 336 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 ZNF747Q9BV97 191 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 ELOVL1Q9BW60 279 aa10.21□□□□□ -0.78
PRPF39-202ENST00000424478 ZNF98A6NK75 572 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 SCGB2A1O75556 95 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 FABP1P07148 127 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 NPPCP23582 126 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 SULT1A2P50226 295 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
PRPF39-202ENST00000424478 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 METTL26Q96S19 204 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 DAZ1Q9NQZ3 744 aaKnown RBP10.2□□□□□ -0.78
PRPF39-202ENST00000424478 C2orf70A6NJV1 201 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 OR7C2O60412 319 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 FOLR2P14207 255 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 ZNF503Q96F45 646 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 SLC25A2Q9BXI2 301 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 HRH4Q9H3N8 390 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 UBQLN2Q9UHD9 624 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 TFPI2P48307 235 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 IL34Q6ZMJ4 242 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 C1QL4Q86Z23 238 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 FUT9Q9Y231 359 aa10.2□□□□□ -0.78
PRPF39-202ENST00000424478 CBLN1P23435 193 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 BLNKQ8WV28 456 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 MLXQ9UH92 298 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 H3BRN7 92 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 OVOL1O14753 267 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 OR8I2Q8N0Y5 310 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 FAM167A-AS1Q96KT0 104 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
PRPF39-202ENST00000424478 BUB3O43684 328 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 IFNA7P01567 189 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 PLP1P60201 277 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 PXDC1Q5TGL8 231 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
PRPF39-202ENST00000424478 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
PRPF39-202ENST00000424478 OR1L4Q8NGR5 311 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms