RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 HYPMO75409 117 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 ORM2P19652 201 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 BMI1P35226 326 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 DEFA6Q01524 100 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 CD300EQ496F6 205 aaPredicted RBP12.83□□□□□ -0.36
COL7A1-202ENST00000422991 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 NARS2Q96I59 477 aaKnown RBP12.83□□□□□ -0.36
COL7A1-202ENST00000422991 ARL6Q9H0F7 186 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 KCNIP2Q9NS61 270 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 SLC39A9Q9NUM3 307 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
COL7A1-202ENST00000422991 IGHV3-66A0A0C4DH42 116 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 A0A0D9SG52 128 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 A0A1W2PS18 150 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 TAAR5O14804 337 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 B2MP61769 119 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 KPRPQ5T749 579 aaPredicted RBP12.82□□□□□ -0.36
COL7A1-202ENST00000422991 RPL7L1Q6DKI1 246 aaKnown RBP12.82□□□□□ -0.36
COL7A1-202ENST00000422991 PATE2Q6UY27 113 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 ZNF709Q8N972 641 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 HYLS1Q96M11 299 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 RNF2Q99496 336 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 HIGD1AQ9Y241 93 aa12.82□□□□□ -0.36
COL7A1-202ENST00000422991 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 BUB3O43684 328 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 COX7A2P2O60397 106 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 OR5G3P0C626 314 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 BEAN1Q3B7T3 259 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 ZFP69Q49AA0 526 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 ARPC5LQ9BPX5 153 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 CYTL1Q9NRR1 136 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 PFDN2Q9UHV9 154 aa12.81□□□□□ -0.36
COL7A1-202ENST00000422991 BORCS7-ASMTA0A0B4J1R7 106 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 H3BRN7 92 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 BCL2L11O43521 198 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 C16orf54Q6UWD8 224 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 Q6ZRG5 221 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 HSD17B11Q8NBQ5 300 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 GLMPQ8WWB7 406 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 PPP1R14BQ96C90 147 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 SHANK2-AS3Q9BTD1 123 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 SLC25A39Q9BZJ4 359 aaPredicted RBP12.8□□□□□ -0.36
COL7A1-202ENST00000422991 ARV1Q9H2C2 271 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 TIMM9Q9Y5J7 89 aa12.8□□□□□ -0.36
COL7A1-202ENST00000422991 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
COL7A1-202ENST00000422991 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 S100A7P31151 101 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 TMUB2Q71RG4 321 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 TCF24Q7RTU0 167 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 OR1L4Q8NGR5 311 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 TMEM37Q8WXS4 190 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 PFDN5Q99471 154 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 RFNGQ9Y644 331 aa12.79□□□□□ -0.36
COL7A1-202ENST00000422991 SORL1Q92673 2214 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 ZNF98A6NK75 572 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 JTBO76095 146 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 CD5P06127 495 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 ATP6V0CP27449 155 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
COL7A1-202ENST00000422991 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 C1orf194Q5T5A4 169 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 C10orf113Q5VZT2 155 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 LAMTOR1Q6IAA8 161 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 S100A7AQ86SG5 101 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
COL7A1-202ENST00000422991 DNAJC4Q9NNZ3 241 aa12.78□□□□□ -0.36
COL7A1-202ENST00000422991 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
COL7A1-202ENST00000422991 ZNF785A8K8V0 405 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 TSPAN4O14817 238 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 PFDN1O60925 122 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 RBPMS2Q6ZRY4 209 aaKnown RBP12.77□□□□□ -0.37
COL7A1-202ENST00000422991 LINC00305Q7Z4B0 112 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 C9orf62Q8N4C0 152 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 GATAD1Q8WUU5 269 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 SH3BGRL3Q9H299 93 aa12.77□□□□□ -0.37
COL7A1-202ENST00000422991 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
COL7A1-202ENST00000422991 HELTA6NFD8 242 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 SIGLEC15Q6ZMC9 328 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 OR2G3Q8NGZ4 309 aa12.76□□□□□ -0.37
COL7A1-202ENST00000422991 GNPNAT1Q96EK6 184 aaPredicted RBP12.76□□□□□ -0.37
COL7A1-202ENST00000422991 SPAG8Q99932 426 aaPredicted RBP12.76□□□□□ -0.37
COL7A1-202ENST00000422991 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms